Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 916)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47719)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-76	-1.761e+02	0.0000	89.0	9.72%	272.0	0.57%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-55	-1.283e+02	0.0000	39.0	4.26%	31.5	0.07%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-46	-1.069e+02	0.0000	90.0	9.83%	650.8	1.36%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-29	-6.871e+01	0.0000	245.0	26.75%	6034.8	12.62%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-27	-6.231e+01	0.0000	261.0	28.49%	6929.6	14.49%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-22	-5.109e+01	0.0000	168.0	18.34%	3900.5	8.16%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-10	-2.406e+01	0.0000	137.0	14.96%	3999.0	8.36%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-10	-2.374e+01	0.0000	131.0	14.30%	3779.5	7.91%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-9	-2.300e+01	0.0000	243.0	26.53%	8600.1	17.99%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-8	-1.973e+01	0.0000	161.0	17.58%	5281.9	11.05%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-7	-1.796e+01	0.0000	105.0	11.46%	3096.2	6.48%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-7	-1.616e+01	0.0000	119.0	12.99%	3786.4	7.92%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-6	-1.534e+01	0.0000	102.0	11.14%	3146.4	6.58%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-6	-1.527e+01	0.0000	11.0	1.20%	72.8	0.15%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-6	-1.469e+01	0.0000	207.0	22.60%	7778.4	16.27%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-6	-1.396e+01	0.0000	74.0	8.08%	2120.1	4.43%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-5	-1.353e+01	0.0000	76.0	8.30%	2224.8	4.65%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-5	-1.342e+01	0.0000	26.0	2.84%	456.5	0.95%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-5	-1.316e+01	0.0000	352.0	38.43%	14907.4	31.18%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-5	-1.235e+01	0.0001	177.0	19.32%	6667.3	13.95%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-5	-1.201e+01	0.0001	17.0	1.86%	239.8	0.50%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-5	-1.180e+01	0.0001	106.0	11.57%	3583.1	7.49%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-4	-1.115e+01	0.0002	143.0	15.61%	5264.7	11.01%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-4	-1.093e+01	0.0003	72.0	7.86%	2235.7	4.68%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-4	-1.048e+01	0.0004	17.0	1.86%	270.6	0.57%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-4	-1.025e+01	0.0005	86.0	9.39%	2866.4	6.00%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-4	-9.636e+00	0.0009	117.0	12.77%	4266.4	8.92%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-4	-9.471e+00	0.0010	14.0	1.53%	210.6	0.44%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-3	-8.607e+00	0.0023	98.0	10.70%	3534.8	7.39%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-3	-8.598e+00	0.0023	43.0	4.69%	1236.3	2.59%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-3	-8.318e+00	0.0029	32.0	3.49%	836.8	1.75%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-3	-8.224e+00	0.0030	55.0	6.00%	1738.8	3.64%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-3	-7.717e+00	0.0049	46.0	5.02%	1410.8	2.95%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-3	-7.695e+00	0.0049	33.0	3.60%	905.1	1.89%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-3	-7.457e+00	0.0060	34.0	3.71%	956.5	2.00%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-3	-7.330e+00	0.0066	48.0	5.24%	1518.5	3.18%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-3	-7.309e+00	0.0066	12.0	1.31%	202.4	0.42%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-3	-7.232e+00	0.0069	86.0	9.39%	3149.8	6.59%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-2	-6.693e+00	0.0116	72.0	7.86%	2590.9	5.42%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-2	-6.509e+00	0.0136	18.0	1.97%	417.9	0.87%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-2	-6.471e+00	0.0137	30.0	3.28%	859.2	1.80%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-2	-6.099e+00	0.0195	4.0	0.44%	28.3	0.06%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-2	-6.099e+00	0.0195	64.0	6.99%	2301.0	4.81%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-2	-6.062e+00	0.0195	15.0	1.64%	332.6	0.70%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-2	-5.890e+00	0.0224	46.0	5.02%	1548.6	3.24%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-2	-5.731e+00	0.0257	35.0	3.82%	1105.6	2.31%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-2	-5.712e+00	0.0257	14.0	1.53%	311.4	0.65%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-2	-5.669e+00	0.0262	69.0	7.53%	2567.9	5.37%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-2	-5.516e+00	0.0299	61.0	6.66%	2230.1	4.66%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-2	-5.389e+00	0.0332	39.0	4.26%	1296.3	2.71%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-2	-5.255e+00	0.0373	22.0	2.40%	621.8	1.30%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-2	-5.217e+00	0.0380	50.0	5.46%	1781.0	3.73%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-5.075e+00	0.0429	53.0	5.79%	1925.2	4.03%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-2	-5.051e+00	0.0432	41.0	4.48%	1409.3	2.95%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-2	-5.010e+00	0.0442	24.0	2.62%	713.2	1.49%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-5.009e+00	0.0442	22.0	2.40%	635.4	1.33%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-2	-4.976e+00	0.0442	20.0	2.18%	560.9	1.17%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-2	-4.729e+00	0.0554	36.0	3.93%	1225.9	2.56%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-2	-4.669e+00	0.0579	48.0	5.24%	1748.8	3.66%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-4.412e+00	0.0736	79.0	8.62%	3181.1	6.65%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-4.405e+00	0.0736	13.0	1.42%	328.3	0.69%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-1	-4.214e+00	0.0869	10.0	1.09%	230.1	0.48%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-1	-4.201e+00	0.0869	19.0	2.07%	567.0	1.19%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-1	-4.159e+00	0.0888	65.0	7.10%	2572.7	5.38%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-4.154e+00	0.0888	3.0	0.33%	27.3	0.06%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-1	-4.146e+00	0.0888	59.0	6.44%	2300.5	4.81%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-4.121e+00	0.0888	68.0	7.42%	2716.0	5.68%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-4.107e+00	0.0888	4.0	0.44%	50.3	0.11%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-1	-3.963e+00	0.1003	37.0	4.04%	1339.6	2.80%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-3.961e+00	0.1003	9.0	0.98%	205.7	0.43%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-1	-3.951e+00	0.1003	78.0	8.52%	3205.0	6.70%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-3.921e+00	0.1003	6.0	0.66%	109.4	0.23%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e-1	-3.912e+00	0.1003	41.0	4.48%	1520.5	3.18%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-1	-3.855e+00	0.1041	19.0	2.07%	588.0	1.23%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-3.765e+00	0.1124	26.0	2.84%	884.2	1.85%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-3.717e+00	0.1164	20.0	2.18%	638.8	1.34%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-3.663e+00	0.1213	10.0	1.09%	252.9	0.53%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-3.649e+00	0.1214	88.0	9.61%	3725.3	7.79%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-3.621e+00	0.1232	74.0	8.08%	3069.1	6.42%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-1	-3.608e+00	0.1233	27.0	2.95%	940.8	1.97%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-1	-3.549e+00	0.1292	57.0	6.22%	2289.4	4.79%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-3.518e+00	0.1317	71.0	7.75%	2945.8	6.16%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-3.492e+00	0.1335	31.0	3.38%	1124.2	2.35%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-1	-3.396e+00	0.1452	82.0	8.95%	3485.5	7.29%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-3.383e+00	0.1453	96.0	10.48%	4156.6	8.69%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-1	-3.266e+00	0.1615	11.0	1.20%	308.1	0.64%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-1	-3.264e+00	0.1615	24.0	2.62%	842.4	1.76%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-1	-3.250e+00	0.1615	32.0	3.49%	1193.1	2.50%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-3.211e+00	0.1649	95.0	10.37%	4142.8	8.66%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-3.166e+00	0.1706	10.0	1.09%	275.3	0.58%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-1	-3.165e+00	0.1706	101.0	11.03%	4441.0	9.29%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-3.130e+00	0.1729	23.0	2.51%	811.8	1.70%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-1	-3.114e+00	0.1739	60.0	6.55%	2494.8	5.22%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-3.021e+00	0.1888	8.0	0.87%	207.4	0.43%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-1	-3.015e+00	0.1888	35.0	3.82%	1354.5	2.83%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.985e+00	0.1917	22.0	2.40%	781.4	1.63%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-2.940e+00	0.1983	19.0	2.07%	656.1	1.37%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.846e+00	0.2156	69.0	7.53%	2966.4	6.20%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-2.827e+00	0.2177	32.0	3.49%	1241.5	2.60%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-2.788e+00	0.2241	119.0	12.99%	5405.9	11.31%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-1	-2.767e+00	0.2265	62.0	6.77%	2647.4	5.54%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-2.723e+00	0.2343	72.0	7.86%	3133.9	6.55%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.660e+00	0.2472	8.0	0.87%	224.3	0.47%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-1	-2.658e+00	0.2472	9.0	0.98%	263.9	0.55%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-1	-2.631e+00	0.2496	153.0	16.70%	7131.2	14.92%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.622e+00	0.2496	9.0	0.98%	265.6	0.56%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-1	-2.515e+00	0.2752	75.0	8.19%	3320.8	6.95%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.464e+00	0.2867	163.0	17.79%	7681.4	16.07%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-2.460e+00	0.2867	43.0	4.69%	1800.4	3.77%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-2.447e+00	0.2867	23.0	2.51%	879.7	1.84%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-1	-2.447e+00	0.2867	27.0	2.95%	1060.3	2.22%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-1	-2.441e+00	0.2867	64.0	6.99%	2804.2	5.87%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e-1	-2.438e+00	0.2867	14.0	1.53%	484.7	1.01%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-2.436e+00	0.2867	40.0	4.37%	1663.6	3.48%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-1	-2.417e+00	0.2867	43.0	4.69%	1807.9	3.78%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-2.408e+00	0.2867	131.0	14.30%	6100.7	12.76%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-2.396e+00	0.2867	10.0	1.09%	319.2	0.67%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-2.392e+00	0.2867	38.0	4.15%	1576.4	3.30%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-1	-2.387e+00	0.2867	12.0	1.31%	403.1	0.84%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-1	-2.361e+00	0.2867	89.0	9.72%	4037.4	8.44%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-2.335e+00	0.2914	19.0	2.07%	712.7	1.49%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-2.325e+00	0.2918	97.0	10.59%	4439.3	9.29%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.301e+00	0.2964	50.0	5.46%	2159.1	4.52%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-2.294e+00	0.2964	7.0	0.76%	204.7	0.43%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.248e+00	0.3075	27.0	2.95%	1086.0	2.27%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-2.182e+00	0.3258	19.0	2.07%	728.6	1.52%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-2.177e+00	0.3258	10.0	1.09%	334.2	0.70%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.173e+00	0.3258	27.0	2.95%	1096.0	2.29%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-2.136e+00	0.3334	18.0	1.97%	688.6	1.44%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-2.130e+00	0.3334	20.0	2.18%	779.5	1.63%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.113e+00	0.3357	6.0	0.66%	174.4	0.36%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.111e+00	0.3357	8.0	0.87%	255.3	0.53%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.104e+00	0.3357	3.0	0.33%	63.2	0.13%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-2.095e+00	0.3357	10.0	1.09%	340.3	0.71%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.087e+00	0.3357	20.0	2.18%	784.3	1.64%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-2.048e+00	0.3451	46.0	5.02%	2014.9	4.21%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-1.973e+00	0.3694	3.0	0.33%	67.1	0.14%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.953e+00	0.3743	25.0	2.73%	1032.2	2.16%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.946e+00	0.3743	6.0	0.66%	183.5	0.38%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.942e+00	0.3743	144.0	15.72%	6898.9	14.43%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.924e+00	0.3770	12.0	1.31%	442.0	0.92%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.906e+00	0.3811	29.0	3.17%	1227.2	2.57%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.899e+00	0.3813	21.0	2.29%	853.8	1.79%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.867e+00	0.3908	5.0	0.55%	147.9	0.31%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.865e+00	0.3908	59.0	6.44%	2684.7	5.62%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.838e+00	0.3969	12.0	1.31%	449.1	0.94%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.822e+00	0.4003	21.0	2.29%	863.3	1.81%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.817e+00	0.4003	29.0	3.17%	1241.9	2.60%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.817e+00	0.4003	4.0	0.44%	110.2	0.23%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.817e+00	0.4003	4.0	0.44%	110.2	0.23%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.817e+00	0.4003	12.0	1.31%	451.9	0.95%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.799e+00	0.4003	14.0	1.53%	543.3	1.14%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.794e+00	0.4003	7.0	0.76%	234.1	0.49%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.790e+00	0.4003	14.0	1.53%	544.6	1.14%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.786e+00	0.4003	15.0	1.64%	590.2	1.23%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.761e+00	0.4012	6.0	0.66%	194.5	0.41%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.758e+00	0.4012	2.0	0.22%	39.5	0.08%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-1.751e+00	0.4012	8.0	0.87%	280.1	0.59%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.748e+00	0.4012	37.0	4.04%	1637.6	3.43%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.648e+00	0.4380	32.0	3.49%	1414.4	2.96%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.639e+00	0.4392	15.0	1.64%	607.6	1.27%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-1.635e+00	0.4392	13.0	1.42%	516.0	1.08%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.595e+00	0.4531	21.0	2.29%	895.6	1.87%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.591e+00	0.4531	57.0	6.22%	2652.5	5.55%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.571e+00	0.4584	20.0	2.18%	851.2	1.78%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.555e+00	0.4630	53.0	5.79%	2463.7	5.15%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.532e+00	0.4709	4.0	0.44%	124.1	0.26%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.526e+00	0.4709	19.0	2.07%	810.6	1.70%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.512e+00	0.4750	45.0	4.91%	2079.0	4.35%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.509e+00	0.4750	105.0	11.46%	5083.1	10.63%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.488e+00	0.4809	5.0	0.55%	169.4	0.35%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.480e+00	0.4818	2.0	0.22%	47.8	0.10%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.443e+00	0.4972	5.0	0.55%	172.4	0.36%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.441e+00	0.4972	15.0	1.64%	632.1	1.32%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.440e+00	0.4972	8.0	0.87%	306.1	0.64%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.404e+00	0.5080	15.0	1.64%	637.8	1.33%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.385e+00	0.5150	5.0	0.55%	176.8	0.37%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.378e+00	0.5156	6.0	0.66%	221.3	0.46%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.353e+00	0.5256	16.0	1.75%	692.5	1.45%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.344e+00	0.5274	19.0	2.07%	838.9	1.75%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.324e+00	0.5352	41.0	4.48%	1925.8	4.03%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.311e+00	0.5393	35.0	3.82%	1630.9	3.41%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-1.301e+00	0.5414	33.0	3.60%	1533.0	3.21%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.298e+00	0.5414	81.0	8.84%	3944.7	8.25%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.269e+00	0.5532	34.0	3.71%	1590.1	3.33%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.251e+00	0.5602	10.0	1.09%	419.5	0.88%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.208e+00	0.5814	17.0	1.86%	763.2	1.60%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.204e+00	0.5814	56.0	6.11%	2711.2	5.67%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.187e+00	0.5877	1.0	0.11%	19.6	0.04%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.184e+00	0.5877	52.0	5.68%	2515.3	5.26%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.184e+00	0.5877	72.0	7.86%	3529.0	7.38%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.176e+00	0.5877	5.0	0.55%	192.3	0.40%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.164e+00	0.5889	8.0	0.87%	334.1	0.70%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.134e+00	0.6036	11.0	1.20%	482.3	1.01%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.108e+00	0.6161	28.0	3.06%	1328.0	2.78%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.064e+00	0.6411	11.0	1.20%	492.9	1.03%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.039e+00	0.6536	2.0	0.22%	65.1	0.14%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.038e+00	0.6536	87.0	9.50%	4351.1	9.10%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.030e+00	0.6536	5.0	0.55%	205.7	0.43%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.028e+00	0.6536	20.0	2.18%	945.5	1.98%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.015e+00	0.6564	14.0	1.53%	648.9	1.36%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.013e+00	0.6564	4.0	0.44%	159.8	0.33%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.008e+00	0.6564	15.0	1.64%	699.9	1.46%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-9.896e-01	0.6633	4.0	0.44%	161.1	0.34%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-9.823e-01	0.6649	8.0	0.87%	356.3	0.75%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-9.746e-01	0.6667	77.0	8.41%	3865.4	8.08%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-9.596e-01	0.6736	8.0	0.87%	359.2	0.75%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-9.556e-01	0.6736	79.0	8.62%	3976.8	8.32%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-9.223e-01	0.6925	6.0	0.66%	265.2	0.55%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-9.134e-01	0.6953	2.0	0.22%	72.6	0.15%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-9.120e-01	0.6953	4.0	0.44%	168.4	0.35%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-9.047e-01	0.6953	20.0	2.18%	972.6	2.03%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-8.975e-01	0.6966	15.0	1.64%	720.6	1.51%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-8.936e-01	0.6966	86.0	9.39%	4365.3	9.13%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-8.885e-01	0.6966	109.0	11.90%	5556.9	11.62%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-8.777e-01	0.7006	10.0	1.09%	471.5	0.99%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-8.758e-01	0.7006	17.0	1.86%	826.2	1.73%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-8.721e-01	0.7006	87.0	9.50%	4427.9	9.26%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-8.648e-01	0.7006	6.0	0.66%	272.7	0.57%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-8.604e-01	0.7006	4.0	0.44%	173.4	0.36%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-8.580e-01	0.7006	7.0	0.76%	323.5	0.68%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-8.491e-01	0.7015	28.0	3.06%	1395.0	2.92%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-8.490e-01	0.7015	6.0	0.66%	274.6	0.57%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-8.457e-01	0.7015	76.0	8.30%	3871.4	8.10%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-8.400e-01	0.7015	8.0	0.87%	376.5	0.79%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-8.396e-01	0.7015	12.0	1.31%	580.0	1.21%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.348e-01	0.7015	2.0	0.22%	77.9	0.16%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-8.268e-01	0.7015	8.0	0.87%	378.7	0.79%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-8.252e-01	0.7015	9.0	0.98%	430.0	0.90%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.170e-01	0.7015	25.0	2.73%	1250.9	2.62%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-8.118e-01	0.7015	4.0	0.44%	178.8	0.37%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-7.991e-01	0.7056	13.0	1.42%	638.0	1.33%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-7.948e-01	0.7056	8.0	0.87%	383.1	0.80%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-7.917e-01	0.7056	48.0	5.24%	2446.2	5.12%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-7.914e-01	0.7056	2.0	0.22%	80.6	0.17%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-7.840e-01	0.7056	84.0	9.17%	4316.4	9.03%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-7.818e-01	0.7056	5.0	0.55%	232.7	0.49%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-7.818e-01	0.7056	14.0	1.53%	693.3	1.45%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-7.799e-01	0.7056	1.0	0.11%	32.8	0.07%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-7.792e-01	0.7056	190.0	20.74%	9830.2	20.56%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-7.683e-01	0.7056	3.0	0.33%	132.2	0.28%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-7.659e-01	0.7056	5.0	0.55%	234.2	0.49%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-7.645e-01	0.7056	92.0	10.04%	4742.6	9.92%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-7.613e-01	0.7056	82.0	8.95%	4224.1	8.84%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-7.563e-01	0.7056	19.0	2.07%	957.2	2.00%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-7.516e-01	0.7056	20.0	2.18%	1010.5	2.11%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-7.475e-01	0.7056	3.0	0.33%	134.6	0.28%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-7.365e-01	0.7056	1.0	0.11%	34.4	0.07%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-7.287e-01	0.7056	55.0	6.00%	2836.1	5.93%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-7.157e-01	0.7118	10.0	1.09%	501.0	1.05%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-7.123e-01	0.7118	2.0	0.22%	86.5	0.18%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-7.086e-01	0.7118	23.0	2.51%	1178.4	2.46%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-6.840e-01	0.7260	5.0	0.55%	246.0	0.51%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-6.825e-01	0.7260	23.0	2.51%	1186.5	2.48%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-6.824e-01	0.7260	15.0	1.64%	768.1	1.61%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.802e-01	0.7260	13.0	1.42%	664.4	1.39%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-6.493e-01	0.7399	139.0	15.17%	7267.4	15.20%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-6.421e-01	0.7423	2.0	0.22%	92.4	0.19%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-6.413e-01	0.7423	7.0	0.76%	357.4	0.75%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-6.233e-01	0.7506	31.0	3.38%	1626.2	3.40%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-6.194e-01	0.7507	7.0	0.76%	361.5	0.76%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-6.034e-01	0.7599	7.0	0.76%	364.1	0.76%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-6.029e-01	0.7599	12.0	1.31%	630.7	1.32%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-5.861e-01	0.7673	19.0	2.07%	1006.2	2.10%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-5.729e-01	0.7746	17.0	1.86%	904.7	1.89%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.664e-01	0.7766	77.0	8.41%	4075.6	8.52%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-5.625e-01	0.7768	44.0	4.80%	2338.2	4.89%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-5.212e-01	0.8065	1.0	0.11%	47.9	0.10%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-5.171e-01	0.8069	80.0	8.73%	4266.9	8.92%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-4.971e-01	0.8201	3.0	0.33%	164.1	0.34%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-4.965e-01	0.8201	8.0	0.87%	441.5	0.92%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.860e-01	0.8232	28.0	3.06%	1524.7	3.19%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-4.853e-01	0.8232	17.0	1.86%	933.7	1.95%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-4.673e-01	0.8325	15.0	1.64%	832.0	1.74%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-4.605e-01	0.8351	1.0	0.11%	52.5	0.11%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-4.561e-01	0.8359	27.0	2.95%	1484.2	3.10%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-4.504e-01	0.8376	9.0	0.98%	508.3	1.06%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-4.502e-01	0.8376	15.0	1.64%	837.8	1.75%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-4.284e-01	0.8501	1.0	0.11%	55.1	0.12%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-4.252e-01	0.8501	89.0	9.72%	4813.3	10.07%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-4.183e-01	0.8526	1.0	0.11%	56.2	0.12%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-4.128e-01	0.8542	21.0	2.29%	1179.2	2.47%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-4.011e-01	0.8612	13.0	1.42%	745.1	1.56%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-3.992e-01	0.8612	10.0	1.09%	579.7	1.21%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-3.989e-01	0.8612	1.0	0.11%	58.9	0.12%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-3.950e-01	0.8612	3.0	0.33%	181.6	0.38%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.950e-01	0.8612	2.0	0.22%	121.4	0.25%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-3.830e-01	0.8617	26.0	2.84%	1466.2	3.07%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-3.806e-01	0.8617	1.0	0.11%	60.5	0.13%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-3.756e-01	0.8621	11.0	1.20%	643.3	1.35%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-3.728e-01	0.8621	5.0	0.55%	303.3	0.63%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-3.610e-01	0.8688	5.0	0.55%	306.6	0.64%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.530e-01	0.8728	40.0	4.37%	2245.9	4.70%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-3.449e-01	0.8770	22.0	2.40%	1267.8	2.65%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-3.425e-01	0.8770	18.0	1.97%	1047.3	2.19%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-3.364e-01	0.8784	112.0	12.23%	6123.9	12.81%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.249e-01	0.8856	7.0	0.76%	433.9	0.91%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-3.086e-01	0.8972	58.0	6.33%	3255.7	6.81%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.999e-01	0.9020	9.0	0.98%	558.5	1.17%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.967e-01	0.9020	10.0	1.09%	617.9	1.29%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.808e-01	0.9133	121.0	13.21%	6671.6	13.95%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.671e-01	0.9228	2.0	0.22%	145.6	0.30%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-2.594e-01	0.9268	4.0	0.44%	275.0	0.58%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.473e-01	0.9350	11.0	1.20%	698.7	1.46%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.397e-01	0.9391	14.0	1.53%	877.0	1.83%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.383e-01	0.9391	27.0	2.95%	1614.3	3.38%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.325e-01	0.9397	126.0	13.76%	7008.9	14.66%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-2.115e-01	0.9565	19.0	2.07%	1183.0	2.47%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.098e-01	0.9565	6.0	0.66%	418.7	0.88%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.063e-01	0.9565	14.0	1.53%	897.9	1.88%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.058e-01	0.9565	3.0	0.33%	229.5	0.48%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-2.048e-01	0.9565	29.0	3.17%	1755.7	3.67%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.026e-01	0.9565	5.0	0.55%	359.6	0.75%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.975e-01	0.9565	3.0	0.33%	232.5	0.49%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.960e-01	0.9565	1.0	0.11%	90.8	0.19%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.888e-01	0.9565	11.0	1.20%	732.3	1.53%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.715e-01	0.9673	7.0	0.76%	500.1	1.05%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.709e-01	0.9673	28.0	3.06%	1732.4	3.62%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.704e-01	0.9673	13.0	1.42%	864.5	1.81%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.673e-01	0.9673	2.0	0.22%	174.5	0.37%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.617e-01	0.9673	20.0	2.18%	1282.7	2.68%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.616e-01	0.9673	7.0	0.76%	506.1	1.06%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.600e-01	0.9673	47.0	5.13%	2815.6	5.89%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.592e-01	0.9673	23.0	2.51%	1458.1	3.05%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.569e-01	0.9673	2.0	0.22%	178.8	0.37%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.512e-01	0.9673	5.0	0.55%	385.5	0.81%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.433e-01	0.9673	15.0	1.64%	1006.2	2.10%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.342e-01	0.9704	3.0	0.33%	260.9	0.55%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.322e-01	0.9704	17.0	1.86%	1136.2	2.38%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.255e-01	0.9730	174.0	19.00%	9810.4	20.52%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.196e-01	0.9757	14.0	1.53%	970.7	2.03%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.151e-01	0.9772	4.0	0.44%	341.2	0.71%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.136e-01	0.9772	7.0	0.76%	541.5	1.13%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-9.501e-02	0.9910	20.0	2.18%	1362.6	2.85%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-8.833e-02	0.9947	6.0	0.66%	499.0	1.04%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-8.616e-02	0.9947	19.0	2.07%	1316.5	2.75%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-7.166e-02	1.0000	75.0	8.19%	4568.6	9.56%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-6.032e-02	1.0000	13.0	1.42%	992.4	2.08%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-5.976e-02	1.0000	59.0	6.44%	3706.5	7.75%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-5.454e-02	1.0000	1.0	0.11%	153.1	0.32%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-5.243e-02	1.0000	1.0	0.11%	155.1	0.32%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.334e-02	1.0000	8.0	0.87%	700.1	1.46%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-3.583e-02	1.0000	13.0	1.42%	1051.4	2.20%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.999e-02	1.0000	8.0	0.87%	771.1	1.61%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.577e-02	1.0000	8.0	0.87%	792.9	1.66%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.524e-02	1.0000	8.0	0.87%	795.5	1.66%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-5.034e-03	1.0000	8.0	0.87%	889.6	1.86%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	41.7	0.09%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	0.000e+00	1.0000	0.0	0.00%	117.2	0.25%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	67.0	0.14%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	28.0	0.06%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	29.3	0.06%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	49.4	0.10%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	48.2	0.10%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	9.7	0.02%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	1.8	0.00%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	22.6	0.05%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	5.2	0.01%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	11.3	0.02%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	155.4	0.32%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	9.9	0.02%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.3	0.01%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	30.2	0.06%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	6.0	0.01%