Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-145 | -3.340e+02 | 0.0000 | 103.0 | 13.81% | 107.5 | 0.22% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-118 | -2.720e+02 | 0.0000 | 87.0 | 11.66% | 101.4 | 0.21% | motif file (matrix) |
svg |
3 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-108 | -2.503e+02 | 0.0000 | 138.0 | 18.50% | 638.5 | 1.33% | motif file (matrix) |
svg |
4 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-51 | -1.191e+02 | 0.0000 | 237.0 | 31.77% | 5281.8 | 11.01% | motif file (matrix) |
svg |
5 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-48 | -1.115e+02 | 0.0000 | 226.0 | 30.29% | 5071.7 | 10.57% | motif file (matrix) |
svg |
6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-44 | -1.031e+02 | 0.0000 | 153.0 | 20.51% | 2610.0 | 5.44% | motif file (matrix) |
svg |
7 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-39 | -9.164e+01 | 0.0000 | 200.0 | 26.81% | 4654.7 | 9.71% | motif file (matrix) |
svg |
8 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-39 | -9.127e+01 | 0.0000 | 159.0 | 21.31% | 3101.0 | 6.47% | motif file (matrix) |
svg |
9 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-36 | -8.517e+01 | 0.0000 | 112.0 | 15.01% | 1685.3 | 3.51% | motif file (matrix) |
svg |
10 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-35 | -8.260e+01 | 0.0000 | 86.0 | 11.53% | 1006.4 | 2.10% | motif file (matrix) |
svg |
11 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-34 | -7.858e+01 | 0.0000 | 120.0 | 16.09% | 2072.1 | 4.32% | motif file (matrix) |
svg |
12 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-27 | -6.445e+01 | 0.0000 | 89.0 | 11.93% | 1395.0 | 2.91% | motif file (matrix) |
svg |
13 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-25 | -5.823e+01 | 0.0000 | 113.0 | 15.15% | 2350.2 | 4.90% | motif file (matrix) |
svg |
14 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-19 | -4.571e+01 | 0.0000 | 65.0 | 8.71% | 1045.2 | 2.18% | motif file (matrix) |
svg |
15 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-15 | -3.530e+01 | 0.0000 | 39.0 | 5.23% | 493.5 | 1.03% | motif file (matrix) |
svg |
16 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-12 | -2.875e+01 | 0.0000 | 43.0 | 5.76% | 731.6 | 1.53% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-10 | -2.370e+01 | 0.0000 | 52.0 | 6.97% | 1182.9 | 2.47% | motif file (matrix) |
svg |
18 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-10 | -2.319e+01 | 0.0000 | 74.0 | 9.92% | 2086.7 | 4.35% | motif file (matrix) |
svg |
19 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-7 | -1.648e+01 | 0.0000 | 106.0 | 14.21% | 4004.3 | 8.35% | motif file (matrix) |
svg |
20 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 66.0 | 8.85% | 2143.7 | 4.47% | motif file (matrix) |
svg |
21 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.455e+01 | 0.0000 | 276.0 | 37.00% | 13728.3 | 28.62% | motif file (matrix) |
svg |
22 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.358e+01 | 0.0000 | 100.0 | 13.40% | 3949.3 | 8.23% | motif file (matrix) |
svg |
23 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-5 | -1.355e+01 | 0.0000 | 84.0 | 11.26% | 3144.3 | 6.56% | motif file (matrix) |
svg |
24 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.334e+01 | 0.0000 | 149.0 | 19.97% | 6584.5 | 13.73% | motif file (matrix) |
svg |
25 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-5 | -1.332e+01 | 0.0000 | 216.0 | 28.95% | 10375.4 | 21.63% | motif file (matrix) |
svg |
26 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.307e+01 | 0.0000 | 84.0 | 11.26% | 3183.2 | 6.64% | motif file (matrix) |
svg |
27 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-5 | -1.283e+01 | 0.0000 | 42.0 | 5.63% | 1225.8 | 2.56% | motif file (matrix) |
svg |
28 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-5 | -1.264e+01 | 0.0000 | 66.0 | 8.85% | 2334.4 | 4.87% | motif file (matrix) |
svg |
29 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.249e+01 | 0.0000 | 12.0 | 1.61% | 143.9 | 0.30% | motif file (matrix) |
svg |
30 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.160e+01 | 0.0001 | 83.0 | 11.13% | 3260.4 | 6.80% | motif file (matrix) |
svg |
31 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.150e+01 | 0.0001 | 71.0 | 9.52% | 2666.4 | 5.56% | motif file (matrix) |
svg |
32 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.131e+01 | 0.0001 | 117.0 | 15.68% | 5077.5 | 10.59% | motif file (matrix) |
svg |
33 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-4 | -1.094e+01 | 0.0002 | 135.0 | 18.10% | 6106.3 | 12.73% | motif file (matrix) |
svg |
34 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-4 | -1.091e+01 | 0.0002 | 148.0 | 19.84% | 6833.1 | 14.25% | motif file (matrix) |
svg |
35 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -9.987e+00 | 0.0005 | 66.0 | 8.85% | 2544.0 | 5.30% | motif file (matrix) |
svg |
36 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.617e+00 | 0.0007 | 185.0 | 24.80% | 9142.2 | 19.06% | motif file (matrix) |
svg |
37 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-4 | -9.463e+00 | 0.0008 | 60.0 | 8.04% | 2289.4 | 4.77% | motif file (matrix) |
svg |
38 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-4 | -9.222e+00 | 0.0009 | 90.0 | 12.06% | 3866.3 | 8.06% | motif file (matrix) |
svg |
39 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -9.040e+00 | 0.0011 | 24.0 | 3.22% | 648.5 | 1.35% | motif file (matrix) |
svg |
40 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.113e+00 | 0.0027 | 88.0 | 11.80% | 3889.6 | 8.11% | motif file (matrix) |
svg |
41 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-3 | -7.952e+00 | 0.0031 | 100.0 | 13.40% | 4565.8 | 9.52% | motif file (matrix) |
svg |
42 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -7.439e+00 | 0.0051 | 10.0 | 1.34% | 178.8 | 0.37% | motif file (matrix) |
svg |
43 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.149e+00 | 0.0066 | 33.0 | 4.42% | 1154.9 | 2.41% | motif file (matrix) |
svg |
44 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -7.034e+00 | 0.0073 | 46.0 | 6.17% | 1800.0 | 3.75% | motif file (matrix) |
svg |
45 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -6.951e+00 | 0.0078 | 35.0 | 4.69% | 1264.0 | 2.64% | motif file (matrix) |
svg |
46 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -6.647e+00 | 0.0103 | 71.0 | 9.52% | 3151.0 | 6.57% | motif file (matrix) |
svg |
47 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.627e+00 | 0.0103 | 26.0 | 3.49% | 862.1 | 1.80% | motif file (matrix) |
svg |
48 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.620e+00 | 0.0103 | 74.0 | 9.92% | 3317.5 | 6.92% | motif file (matrix) |
svg |
49 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -6.450e+00 | 0.0117 | 90.0 | 12.06% | 4221.6 | 8.80% | motif file (matrix) |
svg |
50 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.142e+00 | 0.0157 | 192.0 | 25.74% | 10218.0 | 21.30% | motif file (matrix) |
svg |
51 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -5.256e+00 | 0.0372 | 64.0 | 8.58% | 2952.0 | 6.16% | motif file (matrix) |
svg |
52 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.988e+00 | 0.0477 | 68.0 | 9.12% | 3212.6 | 6.70% | motif file (matrix) |
svg |
53 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -4.904e+00 | 0.0509 | 58.0 | 7.77% | 2671.3 | 5.57% | motif file (matrix) |
svg |
54 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.877e+00 | 0.0514 | 52.0 | 6.97% | 2347.7 | 4.90% | motif file (matrix) |
svg |
55 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -4.681e+00 | 0.0613 | 137.0 | 18.36% | 7261.2 | 15.14% | motif file (matrix) |
svg |
56 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -4.610e+00 | 0.0647 | 55.0 | 7.37% | 2547.7 | 5.31% | motif file (matrix) |
svg |