Homer de novo Motif Results (hs_EmbryonicStemCell_H1hESC_normal_SIX5_SRX100450_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 797
Total background sequences = 45311
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A C T A C T G C T A G T A C G C T G A T C A G G C A T A G C T C T A G C A G T T C G A A C T G A C G T 1e-217-5.006e+0222.46%0.59%20.1bp (38.3bp)GFY(?)/Promoter/Homer(0.940)
More Information | Similar Motifs Found		motif file (matrix)
2 C T G A C T A G A C T G T C A G A C G T A G T C C T G A C T A G C T A G A C G T A C G T C G A T A G T C G C T A C A T G A C G T 1e-133-3.069e+0210.29%0.10%18.8bp (29.5bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.917)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C T C G A A G T C C G A T G C A T G T A C G A T C T C A G T A C G G A T C 1e-33-7.788e+0117.31%5.25%26.0bp (36.5bp)ELK4/MA0076.2/Jaspar(0.973)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C T G A C C G T A G C T A T A C G C G T A A G C T A C T G A C T G A T G C A T C G T C A G G A T C 1e-31-7.261e+016.15%0.62%26.9bp (33.3bp)YY1/MA0095.2/Jaspar(0.962)
More Information | Similar Motifs Found		motif file (matrix)
5 C T G A A G C T C A G T A C T G A G T C G C T A A G C T C A T G A G T C G A C T 1e-16-3.772e+016.52%1.59%25.1bp (27.4bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
6 G T C A A G T C A C T G A C T G T A C G C G T A C G T A C T G A A C G T A T C G 1e-15-3.464e+012.38%0.17%22.9bp (31.3bp)ETV2/MA0762.1/Jaspar(0.737)
More Information | Similar Motifs Found		motif file (matrix)
7 A C T G T C A G G T A C T A C G T C G A C T A G C G A T G T A C G T C A A T G C C G T A C G A T C T A G C G T A T A G C C T G A 1e-14-3.424e+011.00%0.01%17.7bp (11.3bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.798)
More Information | Similar Motifs Found		motif file (matrix)
8 A C T G A G T C A T C G C T A G C T G A C G T A A T G C G T A C C T G A T G C A G T C A A C T G A T C G 1e-14-3.272e+011.25%0.02%25.8bp (29.7bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.630)
More Information | Similar Motifs Found		motif file (matrix)
9 C T A G A T G C A C T G A T G C A G T C G T A C A C G T T A G C G A C T T C G A A C T G G A C T A T C G 1e-13-3.088e+014.39%0.89%28.3bp (32.5bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.803)
More Information | Similar Motifs Found		motif file (matrix)
10 C G T A C G T A C G T A G C A T A C T G A T G C A G C T A C G T A G T C C G T A A G T C A C G T C G A T 1e-13-3.087e+010.75%0.00%23.6bp (0.0bp)PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.582)
More Information | Similar Motifs Found		motif file (matrix)
11 * C G T A A C T G A C T G A G T C G T A C G A C T A G T C A T C G A G T C A C T G 1e-11-2.756e+013.51%0.64%23.3bp (34.4bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.742)
More Information | Similar Motifs Found		motif file (matrix)
12 * A G T C G T A C A G C T A G T C A C G T A G C T A T G C A G T C A G T C A T G C G T A C A C G T A G T C A G T C A G T C A C G T 1e-11-2.753e+011.00%0.02%23.4bp (28.1bp)KLF5/MA0599.1/Jaspar(0.656)
More Information | Similar Motifs Found		motif file (matrix)
13 * C G T A A G T C A G T C G T C A C G T A A G C T A C T G C T G A A C T G G C T A 1e-9-2.179e+011.51%0.12%25.2bp (32.1bp)NFYB/MA0502.1/Jaspar(0.804)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C T G C T A G A C G T C T G A G A C T A C G T A C T G C T A G A G C T A G T C 1e-8-2.014e+011.00%0.04%31.2bp (27.9bp)HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer(0.643)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C T G A C T G C G T A C T G A A C T G A G T C A G T C C G T A C G T A A C G T 1e-8-1.964e+010.88%0.03%27.7bp (44.5bp)NFY(CCAAT)/Promoter/Homer(0.739)
More Information | Similar Motifs Found		motif file (matrix)
16 * G A C T A G T C A C T G A G T C C T G A A G T C A G T C A C T G A G T C A G T C G T A C A G T C A G T C 1e-8-1.937e+010.50%0.00%22.6bp (0.0bp)Sp1(Zf)/Promoter/Homer(0.787)
More Information | Similar Motifs Found		motif file (matrix)
17 * G T A C G C A T A C G T C G T A A T C G G T A C T C G A C G T A A C T G C A G T 1e-7-1.689e+010.88%0.04%23.4bp (30.9bp)PB0054.1_Rfx3_1/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
18 * A G T C C G A T T A C G A G T C A G T C A C G T A G T C A G T C G T A C C A T G A C T G A G C T A T C G G A C T A G C T A C G T 1e-6-1.501e+010.50%0.01%21.9bp (10.1bp)E2F6/MA0471.1/Jaspar(0.563)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G A C T G C G T A C G T A A G T C A T G C A C T G A G T C A T G C A T G C A C T G A C T G A C T G A G T C A C T G A C T G 1e-6-1.394e+010.38%0.00%18.5bp (0.0bp)PB0102.1_Zic2_1/Jaspar(0.612)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C G T A G T C C G T A A C T G A T G C A G T C A C G T A C T G C G T A A G T C 1e-6-1.387e+010.50%0.01%23.2bp (23.8bp)ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer(0.711)
More Information | Similar Motifs Found		motif file (matrix)
21 * T C A G T A G C A T C G A T G C G T C A C A G T A T C G A G T C A C T G A G T C A T C G A C T G T A G C A T C G A G C T A G T C 1e-5-1.233e+011.38%0.24%21.2bp (34.4bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.879)
More Information | Similar Motifs Found		motif file (matrix)
22 * A T C G A C G T A G T C G T C A A G T C A C T G A C T G C G T A A C T G A C G T A G C T A C G T C T G A 1e-5-1.187e+010.38%0.01%23.2bp (6.6bp)RXRA::VDR/MA0074.1/Jaspar(0.667)
More Information | Similar Motifs Found		motif file (matrix)