p-value: | 1e-7 |
log p-value: | -1.689e+01 |
Information Content per bp: | 1.817 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.88% |
Number of Background Sequences with motif | 18.1 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 48.1 +/- 23.4bp |
Average Position of motif in Background | 46.8 +/- 30.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0054.1_Rfx3_1/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CTTAGCAAGT------ TGTGACCCTTAGCAACCGATTAA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTTAGCAAGT-- TACCATAGCAACGGT |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTTAGCAAGT-- CCGCATAGCAACGGA |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTTAGCAAGT- SCCTAGCAACAG |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTTAGCAAGT---- GANGTTAACTAGTTTNN |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTAGCAAGT------ NANTTTCAAGTGGTTAN |
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PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTTAGCAAGT- -AGAGGAAGTG |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTTAGCAAGT-- -AAGGCAAGTGT |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTTAGCAAGT DCTCAGCAGG- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CTTAGCAAGT-- ---NTCAAGTGG |
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