Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-110 | -2.538e+02 | 0.0000 | 112.0 | 15.11% | 317.9 | 0.67% | motif file (matrix) |
svg |
2 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-103 | -2.382e+02 | 0.0000 | 96.0 | 12.96% | 216.8 | 0.46% | motif file (matrix) |
svg |
3 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-80 | -1.859e+02 | 0.0000 | 95.0 | 12.82% | 369.9 | 0.78% | motif file (matrix) |
svg |
4 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-42 | -9.804e+01 | 0.0000 | 97.0 | 13.09% | 1070.7 | 2.25% | motif file (matrix) |
svg |
5 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-30 | -6.951e+01 | 0.0000 | 64.0 | 8.64% | 644.0 | 1.36% | motif file (matrix) |
svg |
6 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-23 | -5.400e+01 | 0.0000 | 66.0 | 8.91% | 915.1 | 1.93% | motif file (matrix) |
svg |
7 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-21 | -4.925e+01 | 0.0000 | 143.0 | 19.30% | 3851.2 | 8.10% | motif file (matrix) |
svg |
8 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-20 | -4.720e+01 | 0.0000 | 135.0 | 18.22% | 3598.1 | 7.57% | motif file (matrix) |
svg |
9 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-16 | -3.817e+01 | 0.0000 | 124.0 | 16.73% | 3526.5 | 7.42% | motif file (matrix) |
svg |
10 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.497e+01 | 0.0000 | 78.0 | 10.53% | 1775.1 | 3.73% | motif file (matrix) |
svg |
11 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-13 | -3.066e+01 | 0.0000 | 42.0 | 5.67% | 659.0 | 1.39% | motif file (matrix) |
svg |
12 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-12 | -2.810e+01 | 0.0000 | 9.0 | 1.21% | 12.9 | 0.03% | motif file (matrix) |
svg |
13 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.077e+01 | 0.0000 | 57.0 | 7.69% | 1484.1 | 3.12% | motif file (matrix) |
svg |
14 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-8 | -2.026e+01 | 0.0000 | 56.0 | 7.56% | 1465.7 | 3.08% | motif file (matrix) |
svg |
15 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-8 | -1.956e+01 | 0.0000 | 59.0 | 7.96% | 1619.1 | 3.41% | motif file (matrix) |
svg |
16 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-8 | -1.908e+01 | 0.0000 | 66.0 | 8.91% | 1940.1 | 4.08% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 66.0 | 8.91% | 2143.9 | 4.51% | motif file (matrix) |
svg |
18 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-6 | -1.433e+01 | 0.0000 | 15.0 | 2.02% | 192.8 | 0.41% | motif file (matrix) |
svg |
19 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.311e+01 | 0.0000 | 60.0 | 8.10% | 2013.6 | 4.24% | motif file (matrix) |
svg |
20 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.171e+01 | 0.0001 | 20.0 | 2.70% | 401.2 | 0.84% | motif file (matrix) |
svg |
21 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-4 | -1.117e+01 | 0.0002 | 52.0 | 7.02% | 1768.5 | 3.72% | motif file (matrix) |
svg |
22 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -9.850e+00 | 0.0009 | 49.0 | 6.61% | 1718.9 | 3.62% | motif file (matrix) |
svg |
23 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-4 | -9.778e+00 | 0.0009 | 34.0 | 4.59% | 1035.6 | 2.18% | motif file (matrix) |
svg |
24 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.704e+00 | 0.0009 | 219.0 | 29.55% | 11103.3 | 23.36% | motif file (matrix) |
svg |
25 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.637e+00 | 0.0010 | 46.0 | 6.21% | 1591.2 | 3.35% | motif file (matrix) |
svg |
26 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-4 | -9.339e+00 | 0.0012 | 37.0 | 4.99% | 1194.2 | 2.51% | motif file (matrix) |
svg |
27 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.834e+00 | 0.0020 | 5.0 | 0.67% | 31.0 | 0.07% | motif file (matrix) |
svg |
28 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-3 | -8.341e+00 | 0.0031 | 134.0 | 18.08% | 6398.2 | 13.46% | motif file (matrix) |
svg |
29 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-3 | -8.029e+00 | 0.0041 | 14.0 | 1.89% | 298.4 | 0.63% | motif file (matrix) |
svg |
30 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -7.962e+00 | 0.0042 | 54.0 | 7.29% | 2115.4 | 4.45% | motif file (matrix) |
svg |
31 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.882e+00 | 0.0044 | 42.0 | 5.67% | 1528.6 | 3.22% | motif file (matrix) |
svg |
32 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.838e+00 | 0.0045 | 59.0 | 7.96% | 2381.4 | 5.01% | motif file (matrix) |
svg |
33 |
| OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-3 | -7.738e+00 | 0.0048 | 4.0 | 0.54% | 22.6 | 0.05% | motif file (matrix) |
svg |
34 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -6.463e+00 | 0.0167 | 46.0 | 6.21% | 1850.0 | 3.89% | motif file (matrix) |
svg |
35 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.342e+00 | 0.0183 | 145.0 | 19.57% | 7372.0 | 15.51% | motif file (matrix) |
svg |
36 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -6.135e+00 | 0.0219 | 27.0 | 3.64% | 939.1 | 1.98% | motif file (matrix) |
svg |
37 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -5.833e+00 | 0.0288 | 77.0 | 10.39% | 3580.4 | 7.53% | motif file (matrix) |
svg |
38 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-2 | -5.814e+00 | 0.0288 | 7.0 | 0.94% | 119.6 | 0.25% | motif file (matrix) |
svg |
39 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.785e+00 | 0.0288 | 12.0 | 1.62% | 299.5 | 0.63% | motif file (matrix) |
svg |
40 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.379e+00 | 0.0420 | 156.0 | 21.05% | 8216.9 | 17.29% | motif file (matrix) |
svg |
41 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -4.975e+00 | 0.0613 | 93.0 | 12.55% | 4618.5 | 9.72% | motif file (matrix) |
svg |
42 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -4.919e+00 | 0.0633 | 5.0 | 0.67% | 76.8 | 0.16% | motif file (matrix) |
svg |
43 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -4.859e+00 | 0.0657 | 11.0 | 1.48% | 296.2 | 0.62% | motif file (matrix) |
svg |
44 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.844e+00 | 0.0657 | 96.0 | 12.96% | 4814.5 | 10.13% | motif file (matrix) |
svg |
45 |
| OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-2 | -4.650e+00 | 0.0774 | 36.0 | 4.86% | 1516.5 | 3.19% | motif file (matrix) |
svg |