Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 741)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47448)	% of Background Sequences with Motif
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-110	-2.538e+02	0.0000	112.0	15.11%	317.9	0.67%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-103	-2.382e+02	0.0000	96.0	12.96%	216.8	0.46%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-80	-1.859e+02	0.0000	95.0	12.82%	369.9	0.78%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-42	-9.804e+01	0.0000	97.0	13.09%	1070.7	2.25%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-30	-6.951e+01	0.0000	64.0	8.64%	644.0	1.36%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-23	-5.400e+01	0.0000	66.0	8.91%	915.1	1.93%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-21	-4.925e+01	0.0000	143.0	19.30%	3851.2	8.10%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-20	-4.720e+01	0.0000	135.0	18.22%	3598.1	7.57%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-16	-3.817e+01	0.0000	124.0	16.73%	3526.5	7.42%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-15	-3.497e+01	0.0000	78.0	10.53%	1775.1	3.73%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-13	-3.066e+01	0.0000	42.0	5.67%	659.0	1.39%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-12	-2.810e+01	0.0000	9.0	1.21%	12.9	0.03%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-9	-2.077e+01	0.0000	57.0	7.69%	1484.1	3.12%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-8	-2.026e+01	0.0000	56.0	7.56%	1465.7	3.08%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-8	-1.956e+01	0.0000	59.0	7.96%	1619.1	3.41%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-8	-1.908e+01	0.0000	66.0	8.91%	1940.1	4.08%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-6	-1.544e+01	0.0000	66.0	8.91%	2143.9	4.51%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-6	-1.433e+01	0.0000	15.0	2.02%	192.8	0.41%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-5	-1.311e+01	0.0000	60.0	8.10%	2013.6	4.24%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-5	-1.171e+01	0.0001	20.0	2.70%	401.2	0.84%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-4	-1.117e+01	0.0002	52.0	7.02%	1768.5	3.72%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-4	-9.850e+00	0.0009	49.0	6.61%	1718.9	3.62%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-4	-9.778e+00	0.0009	34.0	4.59%	1035.6	2.18%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-4	-9.704e+00	0.0009	219.0	29.55%	11103.3	23.36%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-4	-9.637e+00	0.0010	46.0	6.21%	1591.2	3.35%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-4	-9.339e+00	0.0012	37.0	4.99%	1194.2	2.51%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-3	-8.834e+00	0.0020	5.0	0.67%	31.0	0.07%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-3	-8.341e+00	0.0031	134.0	18.08%	6398.2	13.46%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-3	-8.029e+00	0.0041	14.0	1.89%	298.4	0.63%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-3	-7.962e+00	0.0042	54.0	7.29%	2115.4	4.45%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-3	-7.882e+00	0.0044	42.0	5.67%	1528.6	3.22%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-3	-7.838e+00	0.0045	59.0	7.96%	2381.4	5.01%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e-3	-7.738e+00	0.0048	4.0	0.54%	22.6	0.05%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-6.463e+00	0.0167	46.0	6.21%	1850.0	3.89%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-2	-6.342e+00	0.0183	145.0	19.57%	7372.0	15.51%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-2	-6.135e+00	0.0219	27.0	3.64%	939.1	1.98%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-2	-5.833e+00	0.0288	77.0	10.39%	3580.4	7.53%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e-2	-5.814e+00	0.0288	7.0	0.94%	119.6	0.25%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-2	-5.785e+00	0.0288	12.0	1.62%	299.5	0.63%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-5.379e+00	0.0420	156.0	21.05%	8216.9	17.29%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-2	-4.975e+00	0.0613	93.0	12.55%	4618.5	9.72%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-2	-4.919e+00	0.0633	5.0	0.67%	76.8	0.16%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-2	-4.859e+00	0.0657	11.0	1.48%	296.2	0.62%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-2	-4.844e+00	0.0657	96.0	12.96%	4814.5	10.13%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-2	-4.650e+00	0.0774	36.0	4.86%	1516.5	3.19%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-4.548e+00	0.0838	14.0	1.89%	440.8	0.93%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-4.500e+00	0.0860	31.0	4.18%	1272.5	2.68%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-1	-4.380e+00	0.0950	29.0	3.91%	1181.6	2.49%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-1	-4.299e+00	0.1009	42.0	5.67%	1875.9	3.95%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-1	-4.238e+00	0.1051	12.0	1.62%	368.5	0.78%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-4.222e+00	0.1051	77.0	10.39%	3838.0	8.08%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e-1	-4.112e+00	0.1147	22.0	2.97%	851.3	1.79%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e-1	-4.051e+00	0.1195	6.0	0.81%	130.1	0.27%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-1	-3.987e+00	0.1251	15.0	2.02%	520.3	1.09%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-1	-3.951e+00	0.1273	246.0	33.20%	14082.4	29.63%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-1	-3.942e+00	0.1273	3.0	0.40%	36.4	0.08%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.823e+00	0.1396	13.0	1.75%	437.7	0.92%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e-1	-3.724e+00	0.1515	30.0	4.05%	1302.4	2.74%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-3.672e+00	0.1568	28.0	3.78%	1202.0	2.53%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-3.607e+00	0.1646	87.0	11.74%	4538.8	9.55%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-1	-3.470e+00	0.1857	13.0	1.75%	460.9	0.97%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-3.408e+00	0.1943	37.0	4.99%	1720.5	3.62%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-3.364e+00	0.2000	56.0	7.56%	2793.3	5.88%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-3.318e+00	0.2061	43.0	5.80%	2066.2	4.35%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-3.258e+00	0.2155	36.0	4.86%	1686.4	3.55%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-3.202e+00	0.2243	74.0	9.99%	3865.6	8.13%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e-1	-3.172e+00	0.2278	50.0	6.75%	2485.0	5.23%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-2.972e+00	0.2740	63.0	8.50%	3272.3	6.89%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-2.945e+00	0.2774	31.0	4.18%	1455.0	3.06%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.904e+00	0.2850	15.0	2.02%	603.9	1.27%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-2.877e+00	0.2887	5.0	0.67%	131.2	0.28%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-2.856e+00	0.2907	4.0	0.54%	92.6	0.19%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-1	-2.850e+00	0.2907	51.0	6.88%	2601.3	5.47%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-2.825e+00	0.2917	44.0	5.94%	2204.5	4.64%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-1	-2.823e+00	0.2917	49.0	6.61%	2491.9	5.24%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-2.821e+00	0.2917	50.0	6.75%	2549.5	5.36%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-1	-2.813e+00	0.2917	10.0	1.35%	361.9	0.76%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-2.782e+00	0.2917	8.0	1.08%	268.8	0.57%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-1	-2.780e+00	0.2917	44.0	5.94%	2212.7	4.66%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-1	-2.761e+00	0.2917	26.0	3.51%	1204.1	2.53%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-1	-2.756e+00	0.2917	58.0	7.83%	3026.4	6.37%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-2.749e+00	0.2917	29.0	3.91%	1371.6	2.89%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-1	-2.678e+00	0.3012	45.0	6.07%	2288.1	4.81%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-1	-2.655e+00	0.3047	21.0	2.83%	945.9	1.99%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-1	-2.618e+00	0.3123	7.0	0.94%	231.5	0.49%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.449e+00	0.3658	69.0	9.31%	3745.1	7.88%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-1	-2.380e+00	0.3871	12.0	1.62%	496.3	1.04%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.346e+00	0.3960	55.0	7.42%	2940.3	6.19%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-2.252e+00	0.4304	18.0	2.43%	831.7	1.75%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-2.246e+00	0.4304	51.0	6.88%	2728.0	5.74%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.228e+00	0.4312	62.0	8.37%	3384.1	7.12%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.165e+00	0.4539	18.0	2.43%	842.8	1.77%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-2.165e+00	0.4539	20.0	2.70%	953.3	2.01%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.150e+00	0.4539	10.0	1.35%	413.2	0.87%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.129e+00	0.4560	37.0	4.99%	1931.8	4.06%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.099e+00	0.4647	14.0	1.89%	631.5	1.33%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-2.098e+00	0.4647	5.0	0.67%	167.3	0.35%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-2.084e+00	0.4647	51.0	6.88%	2765.5	5.82%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-2.061e+00	0.4681	3.0	0.40%	79.6	0.17%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.044e+00	0.4713	5.0	0.67%	171.0	0.36%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-2.033e+00	0.4719	1.0	0.13%	9.4	0.02%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.024e+00	0.4719	28.0	3.78%	1429.2	3.01%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-2.015e+00	0.4719	135.0	18.22%	7903.8	16.63%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-1.993e+00	0.4770	4.0	0.54%	126.3	0.27%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.989e+00	0.4770	26.0	3.51%	1320.2	2.78%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.895e+00	0.5160	53.0	7.15%	2932.9	6.17%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.874e+00	0.5220	30.0	4.05%	1573.2	3.31%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.874e+00	0.5220	8.0	1.08%	333.0	0.70%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.852e+00	0.5241	19.0	2.56%	943.0	1.98%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-1.838e+00	0.5267	56.0	7.56%	3128.5	6.58%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-1.833e+00	0.5267	16.0	2.16%	776.0	1.63%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-1.831e+00	0.5267	38.0	5.13%	2053.6	4.32%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.825e+00	0.5267	22.0	2.97%	1118.6	2.35%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.789e+00	0.5335	36.0	4.86%	1944.7	4.09%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.771e+00	0.5387	40.0	5.40%	2186.8	4.60%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-1.766e+00	0.5387	3.0	0.40%	91.3	0.19%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.750e+00	0.5409	13.0	1.75%	618.7	1.30%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.712e+00	0.5566	46.0	6.21%	2560.4	5.39%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.673e+00	0.5738	64.0	8.64%	3662.8	7.71%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.625e+00	0.5970	9.0	1.21%	411.3	0.87%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.618e+00	0.5970	21.0	2.83%	1096.9	2.31%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.615e+00	0.5970	22.0	2.97%	1155.8	2.43%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.599e+00	0.5981	15.0	2.02%	752.8	1.58%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.594e+00	0.5981	65.0	8.77%	3749.2	7.89%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.589e+00	0.5981	16.0	2.16%	811.8	1.71%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.571e+00	0.6004	9.0	1.21%	417.8	0.88%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.561e+00	0.6019	3.0	0.40%	101.8	0.21%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.557e+00	0.6019	22.0	2.97%	1166.2	2.45%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.544e+00	0.6027	125.0	16.87%	7483.9	15.75%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.509e+00	0.6194	81.0	10.93%	4764.8	10.03%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.505e+00	0.6194	3.0	0.40%	104.8	0.22%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-1.501e+00	0.6194	35.0	4.72%	1953.5	4.11%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.487e+00	0.6194	29.0	3.91%	1596.0	3.36%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.449e+00	0.6381	12.0	1.62%	602.6	1.27%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.394e+00	0.6689	6.0	0.81%	270.1	0.57%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.385e+00	0.6697	9.0	1.21%	439.6	0.93%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.382e+00	0.6697	90.0	12.15%	5374.1	11.31%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.377e+00	0.6697	22.0	2.97%	1202.2	2.53%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.363e+00	0.6700	8.0	1.08%	385.9	0.81%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.360e+00	0.6700	12.0	1.62%	615.1	1.29%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.357e+00	0.6700	74.0	9.99%	4390.7	9.24%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.343e+00	0.6700	5.0	0.67%	220.3	0.46%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.340e+00	0.6700	11.0	1.48%	560.2	1.18%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.338e+00	0.6700	9.0	1.21%	445.5	0.94%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.327e+00	0.6700	71.0	9.58%	4216.3	8.87%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-1.314e+00	0.6700	71.0	9.58%	4221.4	8.88%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.300e+00	0.6747	74.0	9.99%	4413.6	9.29%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-1.298e+00	0.6747	7.0	0.94%	336.9	0.71%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.252e+00	0.6989	73.0	9.85%	4371.8	9.20%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.234e+00	0.7064	32.0	4.32%	1842.9	3.88%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.231e+00	0.7064	25.0	3.37%	1416.6	2.98%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.211e+00	0.7132	6.0	0.81%	289.9	0.61%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.204e+00	0.7138	159.0	21.46%	9800.8	20.62%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.199e+00	0.7138	1.0	0.13%	23.1	0.05%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.197e+00	0.7138	7.0	0.94%	348.7	0.73%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.197e+00	0.7138	8.0	1.08%	406.3	0.85%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.185e+00	0.7138	81.0	10.93%	4900.9	10.31%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.173e+00	0.7138	7.0	0.94%	351.6	0.74%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.166e+00	0.7138	39.0	5.26%	2293.6	4.83%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.158e+00	0.7150	7.0	0.94%	353.6	0.74%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.154e+00	0.7150	27.0	3.64%	1558.8	3.28%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.151e+00	0.7150	9.0	1.21%	471.5	0.99%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.138e+00	0.7157	9.0	1.21%	473.9	1.00%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.135e+00	0.7157	34.0	4.59%	1995.0	4.20%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.123e+00	0.7173	12.0	1.62%	654.5	1.38%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.121e+00	0.7173	32.0	4.32%	1875.2	3.95%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.114e+00	0.7173	24.0	3.24%	1385.9	2.92%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.056e+00	0.7533	25.0	3.37%	1463.0	3.08%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.044e+00	0.7581	23.0	3.10%	1342.5	2.82%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.014e+00	0.7765	10.0	1.35%	553.1	1.16%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-9.851e-01	0.7948	8.0	1.08%	437.6	0.92%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-9.812e-01	0.7948	12.0	1.62%	681.9	1.43%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-9.713e-01	0.7966	12.0	1.62%	683.6	1.44%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-9.708e-01	0.7966	26.0	3.51%	1549.1	3.26%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-9.700e-01	0.7966	10.0	1.35%	561.3	1.18%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-9.430e-01	0.8055	3.0	0.40%	144.5	0.30%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-9.422e-01	0.8055	4.0	0.54%	203.6	0.43%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-9.336e-01	0.8055	6.0	0.81%	324.7	0.68%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-9.290e-01	0.8055	66.0	8.91%	4079.3	8.58%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-9.218e-01	0.8055	3.0	0.40%	146.7	0.31%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-9.162e-01	0.8055	38.0	5.13%	2319.1	4.88%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-9.157e-01	0.8055	4.0	0.54%	206.2	0.43%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-8.964e-01	0.8116	45.0	6.07%	2768.5	5.83%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-8.831e-01	0.8180	14.0	1.89%	826.5	1.74%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-8.777e-01	0.8180	35.0	4.72%	2146.0	4.52%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-8.725e-01	0.8180	12.0	1.62%	705.0	1.48%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-8.536e-01	0.8290	17.0	2.29%	1021.2	2.15%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-8.501e-01	0.8290	22.0	2.97%	1336.4	2.81%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-8.422e-01	0.8296	2.0	0.27%	94.3	0.20%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-8.361e-01	0.8303	5.0	0.67%	278.0	0.58%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-8.310e-01	0.8303	48.0	6.48%	2987.4	6.29%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.280e-01	0.8303	6.0	0.81%	341.0	0.72%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-8.187e-01	0.8317	8.0	1.08%	466.7	0.98%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.140e-01	0.8317	10.0	1.35%	592.6	1.25%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-8.111e-01	0.8317	9.0	1.21%	530.5	1.12%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-8.096e-01	0.8317	4.0	0.54%	219.6	0.46%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.031e-01	0.8317	8.0	1.08%	469.4	0.99%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-7.989e-01	0.8317	13.0	1.75%	784.1	1.65%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-7.961e-01	0.8317	36.0	4.86%	2241.8	4.72%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-7.792e-01	0.8350	13.0	1.75%	789.9	1.66%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-7.700e-01	0.8385	76.0	10.26%	4802.6	10.11%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-7.640e-01	0.8394	18.0	2.43%	1110.1	2.34%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-7.628e-01	0.8394	15.0	2.02%	920.6	1.94%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-7.613e-01	0.8394	2.0	0.27%	101.6	0.21%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-7.519e-01	0.8394	40.0	5.40%	2515.4	5.29%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-7.405e-01	0.8426	19.0	2.56%	1182.0	2.49%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-7.294e-01	0.8479	2.0	0.27%	104.8	0.22%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-7.192e-01	0.8525	54.0	7.29%	3426.9	7.21%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-7.053e-01	0.8603	8.0	1.08%	489.2	1.03%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-7.025e-01	0.8603	4.0	0.54%	234.9	0.49%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-6.844e-01	0.8701	1.0	0.13%	45.3	0.10%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-6.780e-01	0.8716	19.0	2.56%	1202.7	2.53%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-6.766e-01	0.8716	10.0	1.35%	624.6	1.31%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-6.717e-01	0.8716	29.0	3.91%	1847.4	3.89%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-6.588e-01	0.8761	3.0	0.40%	176.2	0.37%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-6.570e-01	0.8761	67.0	9.04%	4297.1	9.04%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-6.538e-01	0.8761	12.0	1.62%	759.5	1.60%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-6.520e-01	0.8761	8.0	1.08%	501.2	1.05%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-6.345e-01	0.8813	34.0	4.59%	2186.3	4.60%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-6.193e-01	0.8907	20.0	2.70%	1288.9	2.71%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-6.040e-01	0.9003	31.0	4.18%	2007.2	4.22%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-6.030e-01	0.9003	3.0	0.40%	184.5	0.39%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-6.002e-01	0.9003	1.0	0.13%	51.6	0.11%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-5.993e-01	0.9003	2.0	0.27%	118.1	0.25%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-5.980e-01	0.9003	4.0	0.54%	251.8	0.53%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-5.901e-01	0.9003	12.0	1.62%	779.0	1.64%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-5.896e-01	0.9003	15.0	2.02%	974.9	2.05%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-5.880e-01	0.9003	6.0	0.81%	385.8	0.81%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-5.867e-01	0.9003	23.0	3.10%	1496.1	3.15%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-5.833e-01	0.9003	3.0	0.40%	187.7	0.40%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-5.746e-01	0.9003	17.0	2.29%	1110.5	2.34%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-5.683e-01	0.9003	23.0	3.10%	1505.0	3.17%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-5.565e-01	0.9003	10.0	1.35%	657.6	1.38%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-5.530e-01	0.9003	9.0	1.21%	592.1	1.25%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-5.499e-01	0.9003	11.0	1.48%	725.3	1.53%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-5.441e-01	0.9003	2.0	0.27%	125.8	0.26%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-5.302e-01	0.9038	32.0	4.32%	2110.7	4.44%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-5.239e-01	0.9057	21.0	2.83%	1393.6	2.93%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-5.223e-01	0.9057	3.0	0.40%	197.8	0.42%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.218e-01	0.9057	97.0	13.09%	6337.6	13.33%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-5.004e-01	0.9157	5.0	0.67%	339.0	0.71%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-4.962e-01	0.9158	10.0	1.35%	676.1	1.42%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-4.927e-01	0.9158	165.0	22.27%	10762.3	22.64%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-4.815e-01	0.9217	24.0	3.24%	1611.4	3.39%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-4.812e-01	0.9217	2.0	0.27%	134.8	0.28%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-4.774e-01	0.9217	14.0	1.89%	950.6	2.00%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-4.759e-01	0.9217	11.0	1.48%	750.7	1.58%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-4.683e-01	0.9217	20.0	2.70%	1353.0	2.85%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-4.520e-01	0.9303	51.0	6.88%	3404.4	7.16%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-4.428e-01	0.9351	3.0	0.40%	212.5	0.45%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-4.349e-01	0.9388	22.0	2.97%	1503.7	3.16%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-4.322e-01	0.9388	14.0	1.89%	969.0	2.04%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-4.283e-01	0.9388	38.0	5.13%	2567.5	5.40%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-4.255e-01	0.9388	73.0	9.85%	4866.1	10.24%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-4.208e-01	0.9388	63.0	8.50%	4216.7	8.87%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-4.082e-01	0.9453	11.0	1.48%	776.7	1.63%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-4.020e-01	0.9475	28.0	3.78%	1922.6	4.05%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.930e-01	0.9524	4.0	0.54%	295.2	0.62%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-3.862e-01	0.9552	32.0	4.32%	2199.5	4.63%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-3.858e-01	0.9552	1.0	0.13%	73.0	0.15%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-3.720e-01	0.9614	66.0	8.91%	4459.0	9.38%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-3.715e-01	0.9614	1.0	0.13%	75.8	0.16%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.703e-01	0.9614	5.0	0.67%	373.5	0.79%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-3.687e-01	0.9614	17.0	2.29%	1203.5	2.53%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-3.631e-01	0.9614	18.0	2.43%	1274.6	2.68%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.561e-01	0.9614	8.0	1.08%	590.2	1.24%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-3.424e-01	0.9680	15.0	2.02%	1081.2	2.27%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-3.382e-01	0.9684	1.0	0.13%	80.0	0.17%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-3.320e-01	0.9709	1.0	0.13%	81.1	0.17%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-3.306e-01	0.9709	2.0	0.27%	162.0	0.34%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-3.213e-01	0.9741	44.0	5.94%	3052.4	6.42%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-3.209e-01	0.9741	4.0	0.54%	316.8	0.67%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-3.193e-01	0.9741	16.0	2.16%	1163.8	2.45%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.122e-01	0.9741	52.0	7.02%	3594.4	7.56%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-2.974e-01	0.9832	2.0	0.27%	170.1	0.36%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.961e-01	0.9832	55.0	7.42%	3811.3	8.02%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-2.947e-01	0.9832	15.0	2.02%	1109.5	2.33%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-2.922e-01	0.9832	14.0	1.89%	1041.8	2.19%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-2.915e-01	0.9832	42.0	5.67%	2947.9	6.20%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-2.884e-01	0.9832	4.0	0.54%	327.2	0.69%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.836e-01	0.9832	8.0	1.08%	622.4	1.31%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-2.781e-01	0.9832	18.0	2.43%	1328.0	2.79%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-2.768e-01	0.9832	7.0	0.94%	554.0	1.17%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-2.696e-01	0.9832	3.0	0.40%	257.1	0.54%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-2.669e-01	0.9832	1.0	0.13%	93.5	0.20%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.592e-01	0.9832	6.0	0.81%	488.1	1.03%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	-2.485e-01	0.9892	1.0	0.13%	97.6	0.21%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.447e-01	0.9895	9.0	1.21%	715.7	1.51%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-2.370e-01	0.9937	4.0	0.54%	347.1	0.73%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-2.347e-01	0.9937	8.0	1.08%	648.1	1.36%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.196e-01	1.0000	2.0	0.27%	193.1	0.41%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-2.162e-01	1.0000	64.0	8.64%	4516.7	9.50%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-2.060e-01	1.0000	20.0	2.70%	1527.5	3.21%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.926e-01	1.0000	11.0	1.48%	896.9	1.89%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.890e-01	1.0000	20.0	2.70%	1544.5	3.25%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.851e-01	1.0000	12.0	1.62%	975.9	2.05%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.818e-01	1.0000	9.0	1.21%	757.5	1.59%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.780e-01	1.0000	2.0	0.27%	209.4	0.44%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.780e-01	1.0000	2.0	0.27%	209.5	0.44%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.734e-01	1.0000	2.0	0.27%	211.5	0.44%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.640e-01	1.0000	1.0	0.13%	121.6	0.26%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.616e-01	1.0000	48.0	6.48%	3521.0	7.41%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.562e-01	1.0000	2.0	0.27%	219.8	0.46%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.532e-01	1.0000	17.0	2.29%	1370.0	2.88%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.474e-01	1.0000	140.0	18.89%	9716.1	20.44%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.461e-01	1.0000	53.0	7.15%	3891.4	8.19%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.442e-01	1.0000	5.0	0.67%	478.9	1.01%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.438e-01	1.0000	13.0	1.75%	1088.8	2.29%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.400e-01	1.0000	26.0	3.51%	2029.6	4.27%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.307e-01	1.0000	22.0	2.97%	1758.6	3.70%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.299e-01	1.0000	17.0	2.29%	1399.0	2.94%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.279e-01	1.0000	9.0	1.21%	805.8	1.70%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.223e-01	1.0000	19.0	2.56%	1554.0	3.27%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.202e-01	1.0000	12.0	1.62%	1041.7	2.19%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.164e-01	1.0000	47.0	6.34%	3540.8	7.45%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-1.149e-01	1.0000	36.0	4.86%	2777.3	5.84%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.137e-01	1.0000	19.0	2.56%	1567.6	3.30%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.010e-01	1.0000	1.0	0.13%	150.0	0.32%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-9.940e-02	1.0000	45.0	6.07%	3441.1	7.24%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-9.938e-02	1.0000	1.0	0.13%	151.3	0.32%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-9.479e-02	1.0000	94.0	12.69%	6809.5	14.33%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-8.931e-02	1.0000	3.0	0.40%	355.6	0.75%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-8.235e-02	1.0000	11.0	1.48%	1019.8	2.15%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-8.204e-02	1.0000	2.0	0.27%	269.0	0.57%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-7.381e-02	1.0000	65.0	8.77%	4906.8	10.32%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-6.827e-02	1.0000	14.0	1.89%	1277.1	2.69%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-6.720e-02	1.0000	1.0	0.13%	175.4	0.37%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-6.601e-02	1.0000	7.0	0.94%	728.6	1.53%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-6.317e-02	1.0000	10.0	1.35%	976.9	2.06%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-6.285e-02	1.0000	13.0	1.75%	1212.8	2.55%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.001e-02	1.0000	1.0	0.13%	182.8	0.38%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-6.001e-02	1.0000	1.0	0.13%	182.8	0.38%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-6.000e-02	1.0000	21.0	2.83%	1826.9	3.84%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-5.465e-02	1.0000	9.0	1.21%	914.9	1.93%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-5.124e-02	1.0000	66.0	8.91%	5073.2	10.67%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-4.819e-02	1.0000	11.0	1.48%	1091.1	2.30%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-4.361e-02	1.0000	12.0	1.62%	1184.5	2.49%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-4.352e-02	1.0000	1.0	0.13%	202.5	0.43%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-3.016e-02	1.0000	1.0	0.13%	225.7	0.47%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.857e-02	1.0000	61.0	8.23%	4867.1	10.24%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-2.722e-02	1.0000	18.0	2.43%	1723.9	3.63%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.506e-02	1.0000	2.0	0.27%	357.9	0.75%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.996e-02	1.0000	1.0	0.13%	251.7	0.53%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.579e-02	1.0000	4.0	0.54%	602.8	1.27%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-8.214e-03	1.0000	20.0	2.70%	2053.5	4.32%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-8.173e-03	1.0000	38.0	5.13%	3447.2	7.25%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-6.511e-03	1.0000	1.0	0.13%	322.8	0.68%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-3.113e-03	1.0000	3.0	0.40%	629.5	1.32%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-3.006e-03	1.0000	5.0	0.67%	848.2	1.78%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	79.6	0.17%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	47.3	0.10%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	37.0	0.08%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	0.000e+00	1.0000	0.0	0.00%	178.2	0.37%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	26.4	0.06%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	0.0	0.00%	184.3	0.39%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	37.8	0.08%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	101.6	0.21%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	31.8	0.07%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	19.6	0.04%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	4.0	0.01%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	40.7	0.09%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	14.1	0.03%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	105.1	0.22%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	112.3	0.24%