Homer de novo Motif Results (hs_EmbryonicMesendoderm_HUES64_normal_SALL4_SRX702074_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 722
Total background sequences = 47822
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A A G C T C G A T A T C G C G A T G C A T G C T A A C G T A C T G A G T C C G T A T C G A G T C A 1e-67-1.559e+0211.50%0.75%23.9bp (29.7bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.937)
More Information | Similar Motifs Found
motif file (matrix)
2 C A T G C T A G G T C A C G T A A C G T C A T G A G C T A T G C C T G A T C G A 1e-38-8.840e+0122.85%7.34%24.3bp (31.1bp)TEAD4/MA0809.1/Jaspar(0.940)
More Information | Similar Motifs Found
motif file (matrix)
3 C A G T T A G C G A T C A G T C C G T A A C T G A G T C C G T A C A T G A C T G 1e-28-6.476e+019.56%1.78%20.4bp (30.7bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.936)
More Information | Similar Motifs Found
motif file (matrix)
4 G T C A A G C T G A C T A G T C G A T C G C A T A C G T A C G T C T A G A C G T G A T C G C T A G A C T 1e-22-5.186e+0114.54%4.85%25.5bp (28.8bp)Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.858)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A A C T G A G C T C G T A A C T G C T A G G T A C A C T G A C T G A T C G C T G A G T A C G T C A 1e-16-3.792e+010.97%0.00%13.5bp (15.5bp)SP2/MA0516.1/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
6 A T G C C T G A A T C G A G C T C T A G G T A C A G T C G T C A A C G T A G T C C G A T C G T A A T C G A C G T A C T G A C T G 1e-16-3.792e+010.97%0.00%21.9bp (27.2bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.833)
More Information | Similar Motifs Found
motif file (matrix)
7 A T G C C G T A A G C T A G C T A C G T G T C A T G A C C G T A A C G T C G T A 1e-16-3.739e+015.26%0.94%29.5bp (30.4bp)POU5F1B/MA0792.1/Jaspar(0.826)
More Information | Similar Motifs Found
motif file (matrix)
8 C G T A A T C G G A C T A G T C C G T A A C G T G C T A A G T C C G T A C G A T C G A T A C G T A C T G G T A C C T G A C G T A 1e-12-2.826e+010.97%0.01%27.5bp (2.7bp)OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer(0.550)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G 1e-11-2.763e+010.83%0.01%31.2bp (19.3bp)PB0083.1_Tcf7_1/Jaspar(0.809)
More Information | Similar Motifs Found
motif file (matrix)
10 * G T A C C G T A T A C G G T C A G T C A G C T A A T G C G C A T A C G T G A T C G C T A T A C G A C G T A C G T A G C T T A G C 1e-11-2.674e+011.11%0.02%17.4bp (21.2bp)ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer(0.601)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A G C T C G T A C A T G A C T G A T C G C G A T C G T A A C T G C G T A A G T C C G T A A C T G 1e-11-2.578e+010.69%0.00%20.5bp (0.0bp)MEIS2/MA0774.1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
12 * G A T C C G A T C G T A C G T A C T A G G T C A A G C T A T C G A C G T A C T G A C G T C G T A A C T G A G C T A C G T C T A G 1e-11-2.578e+010.69%0.00%19.5bp (0.0bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.546)
More Information | Similar Motifs Found
motif file (matrix)
13 * A T G C T A G C A C G T C G T A A C T G A C G T A C T G C T A G A C T G A C G T 1e-10-2.508e+011.52%0.07%23.0bp (27.9bp)VENTX/MA0724.1/Jaspar(0.583)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G A T C T A G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G T C 1e-10-2.445e+011.94%0.16%25.8bp (31.3bp)PB0142.1_Jundm2_2/Jaspar(0.872)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T G T A C G T C A A C G T A C G T T C A G C A G T T A G C A C G T A T C G 1e-10-2.395e+015.40%1.55%28.8bp (30.0bp)Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A C G T A G T C A T C A G G C A T C T A G A C T G G T C A G T C A A C G T A C T G C G A T C G T A A G T C A G T C G T A C 1e-9-2.273e+011.11%0.03%24.1bp (24.3bp)TEAD1/MA0090.2/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C T G C T G A 1e-9-2.233e+010.69%0.00%21.6bp (1.6bp)PB0071.1_Sox4_1/Jaspar(0.565)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G T C G A A C G T C A G T C G T A C T G A A G T C C G A T C G T A G T C A T C G A A G C T A C G T 1e-9-2.233e+010.69%0.01%24.7bp (27.1bp)PH0095.1_Lhx5/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A T A G C G T C A C G T A C T A G A C T G A C T G A C T G A C G T A G C T A T G C C G T A A C G T G T A C C G T A 1e-9-2.233e+010.69%0.01%18.0bp (13.5bp)Spz1/MA0111.1/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C 1e-9-2.233e+010.69%0.00%11.3bp (14.1bp)PB0071.1_Sox4_1/Jaspar(0.563)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T A G T C A C T G A C T G C G T A C G T A A C T G A T C G A C T G A T C G A T C G A C G T A C T G T G A C A C T G A C T G 1e-9-2.233e+010.69%0.01%19.7bp (20.3bp)PB0010.1_Egr1_1/Jaspar(0.644)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A C G T A A C T G A G T C G T A C C G T A A T C G A C T G C T A G A C G T C A G T A C T G A C G T 1e-9-2.217e+010.83%0.01%22.7bp (17.6bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.552)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T C A C G T A A T G C C G T A C G T A A G C T C T G A C A T G G T A C A G T C 1e-9-2.208e+011.80%0.16%26.7bp (26.5bp)SOX9/MA0077.1/Jaspar(0.835)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A C G T A C A G T A C G T C G T A C G A T G A T C A G C T C T G A T G A C C G A T A G C T A C G T A T G C C G A T A C G T 1e-9-2.194e+013.19%0.61%28.1bp (28.7bp)PB0061.1_Sox11_1/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A C G T A C T G G A C T A C T G G T A C C A G T T C G A C T G A G T A C C G T A A T C G C G T A C T A G C A T G A G T C 1e-9-2.127e+010.97%0.03%23.7bp (27.6bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.594)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G A T C T A G 1e-8-2.032e+010.69%0.01%13.2bp (34.0bp)Sox3/MA0514.1/Jaspar(0.747)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T G A A C G T A C G T C T A G A C G T A C G T C G T A A C T G A G C T C G T A C T A G C G T A A C T G A C T G G T C A C G T A 1e-8-2.018e+010.83%0.01%24.2bp (37.5bp)Sox5/MA0087.1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A T C G A G T A C G T C A A G T C C G T A A C G T A G C T A G T C A G T C A G T C A G T C C G T A 1e-8-2.013e+010.97%0.03%25.2bp (17.2bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.703)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G T A A C G T A G T C G T C A C T A G A T G C A C G T A C G T C G A T A C T G A C T G C G T A C G T A 1e-7-1.779e+010.69%0.01%16.1bp (17.1bp)TFAP4/MA0691.1/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
30 * C A T G T C G A A G T C C T G A A C G T C G T A A G T C C G A T A T C G C G T A A C T G C A G T C G T A A C G T A C T G A G C T 1e-7-1.721e+010.55%0.00%26.3bp (15.9bp)PH0152.1_Pou6f1_2/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
31 * A T C G G A T C A G T C C G T A G A T C A C T G G T A C C G T A A C T G A T C G 1e-7-1.672e+011.52%0.17%25.5bp (31.3bp)Ahr::Arnt/MA0006.1/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
32 * C T A G T G C A A C G T A G C T C G T A C A T G T A C G A G C T A G C T C G T A 1e-7-1.630e+012.49%0.52%21.3bp (26.8bp)DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer(0.808)
More Information | Similar Motifs Found
motif file (matrix)
33 * C A G T C T G A G T C A G T C A G C T A A G T C A C G T C G T A A C T G A C G T C G A T A C G T A G T C A C G T A C T G G T C A 1e-6-1.560e+010.55%0.01%26.0bp (25.8bp)MF0010.1_Homeobox_class/Jaspar(0.537)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C T G C G A T C G A T A G C T A G C T G T C A A G T C C G T A A T G C C G T A C G T A C G T A A G T C 1e-6-1.533e+010.83%0.03%21.9bp (27.8bp)CEBPA/MA0102.3/Jaspar(0.588)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G A G T C A C G T A C G T A G T C A G T C A C T G A C T G A C G T A C G T 1e-6-1.439e+010.42%0.00%20.6bp (8.0bp)ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer(0.857)
More Information | Similar Motifs Found
motif file (matrix)
36 * C G T A A G C T A G T C G A C T G T A C G A T C G A C T G C T A A G T C G A T C G T A C T G C A T A G C 1e-6-1.439e+010.42%0.00%6.7bp (14.7bp)PB0167.1_Sox13_2/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A C G T A 1e-5-1.232e+010.42%0.00%38.2bp (11.0bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.760)
More Information | Similar Motifs Found
motif file (matrix)
38 * G A T C G A T C G A T C A G C T G T A C G A T C G T A C T A G C G A T C T A G C 1e-4-9.913e+0013.16%8.74%26.7bp (27.1bp)PB0097.1_Zfp281_1/Jaspar(0.859)
More Information | Similar Motifs Found
motif file (matrix)
39 * A G T C G C A T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G C T A C G T A C G T A C G T A G C T 1e-3-6.910e+001.39%0.41%24.0bp (31.2bp)PB0182.1_Srf_2/Jaspar(0.790)
More Information | Similar Motifs Found
motif file (matrix)