Information for 15-RAWRTGCTTTRKTKGC (Motif 20)

C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C G T A C C G T A T G C A A G C T C G T A C G T A C G T A A C T G G T A C C G T A A G C T C G A T A C G T A G T C
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.2 +/- 11.3bp
Average Position of motif in Background42.6 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC--
-TNNTCCTTTGTTCTNNT
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RAWRTGCTTTRKTKGC
AAGATATCCTT-------
 A C G T A C G T C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC
-----NTTTTATTGG-
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC
-----TTTTTATTGG-
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC--
-NNNTCCTTTGTTCTNNN
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC----
---ANNCATTAATTGCTNGN
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC----
---ANNCATTAATTGCTNGN
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC----
---ATTCNTTAATTGCTTGT
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC----
---ATTCNTTAATTGCTTGT
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RAWRTGCTTTRKTKGC----
---ATTNNTTAATTGCTTGT
 C T A G C G T A C G T A C T G A A C G T A C T G A G T C A C G T A C G T A C G T C T G A A C G T A C G T A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T