Homer Known Motif Enrichment Results (hs_EmbryonicEndoderm_HUES64_normal_FOXA1_SRX701973_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 734, Total Background Sequences = 47686
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-278-6.403e+020.0000380.051.77%2460.65.16%motif file (matrix) svg
2 A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer1e-272-6.279e+020.0000276.037.60%880.21.85%motif file (matrix) svg
3 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-242-5.589e+020.0000407.055.45%3768.17.90%motif file (matrix) svg
4 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-233-5.383e+020.0000369.050.27%3006.76.31%motif file (matrix) svg
5 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-203-4.675e+020.0000346.047.14%3101.66.51%motif file (matrix) svg
6 C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-188-4.330e+020.0000309.042.10%2542.15.33%motif file (matrix) svg
7 A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer1e-174-4.028e+020.0000326.044.41%3259.16.84%motif file (matrix) svg
8 T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer1e-160-3.704e+020.0000252.034.33%1840.23.86%motif file (matrix) svg
9 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-157-3.617e+020.0000285.038.83%2657.85.57%motif file (matrix) svg
10 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer1e-146-3.384e+020.0000277.037.74%2705.25.67%motif file (matrix) svg
11 C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer1e-145-3.344e+020.0000261.035.56%2358.64.95%motif file (matrix) svg
12 A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-136-3.137e+020.0000204.027.79%1337.92.81%motif file (matrix) svg
13 A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-105-2.433e+020.0000316.043.05%5336.711.19%motif file (matrix) svg
14 G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-20-4.685e+010.0000152.020.71%4407.09.24%motif file (matrix) svg
15 A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-19-4.590e+010.000087.011.85%1790.43.76%motif file (matrix) svg
16 T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-19-4.554e+010.000080.010.90%1553.73.26%motif file (matrix) svg
17 A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer1e-19-4.543e+010.0000107.014.58%2561.25.37%motif file (matrix) svg
18 T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-18-4.285e+010.0000112.015.26%2859.96.00%motif file (matrix) svg
19 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-9-2.284e+010.0000135.018.39%5013.210.52%motif file (matrix) svg
20 A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-9-2.084e+010.0000168.022.89%6906.214.49%motif file (matrix) svg
21 C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-8-1.888e+010.0000187.025.48%8141.517.08%motif file (matrix) svg
22 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-7-1.752e+010.000068.09.26%2139.64.49%motif file (matrix) svg
23 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-7-1.672e+010.0000114.015.53%4436.89.31%motif file (matrix) svg
24 C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer1e-7-1.616e+010.0000102.013.90%3872.08.12%motif file (matrix) svg
25 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-6-1.598e+010.000040.05.45%1013.62.13%motif file (matrix) svg
26 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-6-1.416e+010.0000144.019.62%6285.213.18%motif file (matrix) svg
27 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-5-1.371e+010.000074.010.08%2669.95.60%motif file (matrix) svg
28 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-5-1.308e+010.000065.08.86%2279.34.78%motif file (matrix) svg
29 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-5-1.294e+010.000085.011.58%3279.76.88%motif file (matrix) svg
30 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-5-1.253e+010.000060.08.17%2078.64.36%motif file (matrix) svg
31 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-5-1.200e+010.000154.07.36%1830.43.84%motif file (matrix) svg
32 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-4-1.068e+010.000329.03.95%789.11.66%motif file (matrix) svg
33 G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-4-1.064e+010.0003179.024.39%8727.518.31%motif file (matrix) svg
34 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-4-1.058e+010.000320.02.72%440.20.92%motif file (matrix) svg
35 A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-4-1.055e+010.0003186.025.34%9150.719.19%motif file (matrix) svg
36 C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-4-1.033e+010.0003257.035.01%13435.628.18%motif file (matrix) svg
37 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-4-1.032e+010.000371.09.67%2796.15.86%motif file (matrix) svg
38 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-4-9.881e+000.0005104.014.17%4590.69.63%motif file (matrix) svg
39 T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-3-9.210e+000.000917.02.32%374.10.78%motif file (matrix) svg
40 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-3-8.486e+000.001940.05.45%1406.42.95%motif file (matrix) svg
41 C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-3-8.437e+000.001943.05.86%1554.13.26%motif file (matrix) svg
42 C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-3-7.940e+000.00319.01.23%138.70.29%motif file (matrix) svg
43 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-3-7.758e+000.003620.02.72%546.81.15%motif file (matrix) svg
44 A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-7.427e+000.004967.09.13%2876.46.03%motif file (matrix) svg
45 C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer1e-3-7.372e+000.005125.03.41%781.21.64%motif file (matrix) svg
46 T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-3-7.332e+000.005211.01.50%216.40.45%motif file (matrix) svg
47 C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-3-7.054e+000.006732.04.36%1125.62.36%motif file (matrix) svg
48 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-3-6.955e+000.007228.03.81%943.51.98%motif file (matrix) svg
49 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-2-6.798e+000.008352.07.08%2151.14.51%motif file (matrix) svg
50 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-6.625e+000.009718.02.45%514.01.08%motif file (matrix) svg
51 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-2-6.449e+000.011316.02.18%438.40.92%motif file (matrix) svg
52 C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-6.437e+000.011333.04.50%1220.02.56%motif file (matrix) svg
53 C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-2-6.286e+000.012829.03.95%1036.72.17%motif file (matrix) svg
54 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-2-6.173e+000.0141117.015.94%5856.612.28%motif file (matrix) svg
55 T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-2-5.965e+000.01709.01.23%184.80.39%motif file (matrix) svg
56 T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.958e+000.017036.04.90%1408.02.95%motif file (matrix) svg
57 C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-2-5.957e+000.017013.01.77%337.00.71%motif file (matrix) svg
58 C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-2-5.737e+000.020232.04.36%1226.52.57%motif file (matrix) svg
59 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-2-5.529e+000.024520.02.72%662.51.39%motif file (matrix) svg
60 C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-2-5.519e+000.02452.00.27%6.60.01%motif file (matrix) svg
61 T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-2-5.491e+000.024632.04.36%1247.72.62%motif file (matrix) svg
62 A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-2-5.354e+000.027827.03.68%1010.02.12%motif file (matrix) svg
63 C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-2-5.076e+000.036112.01.63%333.00.70%motif file (matrix) svg
64 T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-2-5.054e+000.036312.01.63%333.80.70%motif file (matrix) svg
65 T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-2-4.790e+000.046677.010.49%3788.97.95%motif file (matrix) svg
66 C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-2-4.629e+000.053917.02.32%579.11.21%motif file (matrix) svg