Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-58 | -1.338e+02 | 0.0000 | 85.0 | 11.42% | 498.1 | 1.04% | motif file (matrix) |
svg |
2 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-44 | -1.018e+02 | 0.0000 | 141.0 | 18.95% | 2257.9 | 4.71% | motif file (matrix) |
svg |
3 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-43 | -9.977e+01 | 0.0000 | 90.0 | 12.10% | 888.1 | 1.85% | motif file (matrix) |
svg |
4 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-42 | -9.839e+01 | 0.0000 | 116.0 | 15.59% | 1572.9 | 3.28% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-38 | -8.931e+01 | 0.0000 | 202.0 | 27.15% | 4827.7 | 10.07% | motif file (matrix) |
svg |
6 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-38 | -8.846e+01 | 0.0000 | 91.0 | 12.23% | 1054.8 | 2.20% | motif file (matrix) |
svg |
7 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-36 | -8.356e+01 | 0.0000 | 122.0 | 16.40% | 2033.8 | 4.24% | motif file (matrix) |
svg |
8 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-35 | -8.249e+01 | 0.0000 | 99.0 | 13.31% | 1359.9 | 2.84% | motif file (matrix) |
svg |
9 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-32 | -7.508e+01 | 0.0000 | 124.0 | 16.67% | 2294.1 | 4.78% | motif file (matrix) |
svg |
10 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-28 | -6.503e+01 | 0.0000 | 92.0 | 12.37% | 1479.0 | 3.08% | motif file (matrix) |
svg |
11 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-27 | -6.368e+01 | 0.0000 | 130.0 | 17.47% | 2823.8 | 5.89% | motif file (matrix) |
svg |
12 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-25 | -5.879e+01 | 0.0000 | 170.0 | 22.85% | 4628.3 | 9.65% | motif file (matrix) |
svg |
13 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-23 | -5.467e+01 | 0.0000 | 161.0 | 21.64% | 4413.7 | 9.20% | motif file (matrix) |
svg |
14 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-23 | -5.309e+01 | 0.0000 | 96.0 | 12.90% | 1893.9 | 3.95% | motif file (matrix) |
svg |
15 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-16 | -3.899e+01 | 0.0000 | 56.0 | 7.53% | 914.0 | 1.91% | motif file (matrix) |
svg |
16 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-15 | -3.511e+01 | 0.0000 | 52.0 | 6.99% | 873.9 | 1.82% | motif file (matrix) |
svg |
17 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-15 | -3.493e+01 | 0.0000 | 64.0 | 8.60% | 1275.4 | 2.66% | motif file (matrix) |
svg |
18 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-14 | -3.271e+01 | 0.0000 | 84.0 | 11.29% | 2099.3 | 4.38% | motif file (matrix) |
svg |
19 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-13 | -3.123e+01 | 0.0000 | 88.0 | 11.83% | 2321.9 | 4.84% | motif file (matrix) |
svg |
20 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-13 | -3.087e+01 | 0.0000 | 105.0 | 14.11% | 3062.5 | 6.39% | motif file (matrix) |
svg |
21 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-12 | -2.947e+01 | 0.0000 | 168.0 | 22.58% | 6141.7 | 12.81% | motif file (matrix) |
svg |
22 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-12 | -2.871e+01 | 0.0000 | 76.0 | 10.22% | 1935.3 | 4.04% | motif file (matrix) |
svg |
23 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-12 | -2.812e+01 | 0.0000 | 79.0 | 10.62% | 2081.7 | 4.34% | motif file (matrix) |
svg |
24 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-12 | -2.799e+01 | 0.0000 | 106.0 | 14.25% | 3255.9 | 6.79% | motif file (matrix) |
svg |
25 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.684e+01 | 0.0000 | 114.0 | 15.32% | 3687.7 | 7.69% | motif file (matrix) |
svg |
26 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-10 | -2.464e+01 | 0.0000 | 73.0 | 9.81% | 1983.8 | 4.14% | motif file (matrix) |
svg |
27 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-10 | -2.461e+01 | 0.0000 | 291.0 | 39.11% | 13349.1 | 27.84% | motif file (matrix) |
svg |
28 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-10 | -2.377e+01 | 0.0000 | 75.0 | 10.08% | 2107.1 | 4.39% | motif file (matrix) |
svg |
29 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-10 | -2.343e+01 | 0.0000 | 86.0 | 11.56% | 2603.8 | 5.43% | motif file (matrix) |
svg |
30 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-8 | -1.989e+01 | 0.0000 | 86.0 | 11.56% | 2804.8 | 5.85% | motif file (matrix) |
svg |
31 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-8 | -1.984e+01 | 0.0000 | 70.0 | 9.41% | 2085.1 | 4.35% | motif file (matrix) |
svg |
32 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -1.905e+01 | 0.0000 | 54.0 | 7.26% | 1442.6 | 3.01% | motif file (matrix) |
svg |
33 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-7 | -1.760e+01 | 0.0000 | 84.0 | 11.29% | 2857.0 | 5.96% | motif file (matrix) |
svg |
34 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.723e+01 | 0.0000 | 35.0 | 4.70% | 770.5 | 1.61% | motif file (matrix) |
svg |
35 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-7 | -1.721e+01 | 0.0000 | 64.0 | 8.60% | 1960.8 | 4.09% | motif file (matrix) |
svg |
36 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-7 | -1.706e+01 | 0.0000 | 82.0 | 11.02% | 2797.2 | 5.83% | motif file (matrix) |
svg |
37 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.654e+01 | 0.0000 | 72.0 | 9.68% | 2362.5 | 4.93% | motif file (matrix) |
svg |
38 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.640e+01 | 0.0000 | 22.0 | 2.96% | 354.6 | 0.74% | motif file (matrix) |
svg |
39 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-6 | -1.598e+01 | 0.0000 | 99.0 | 13.31% | 3704.1 | 7.72% | motif file (matrix) |
svg |
40 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.582e+01 | 0.0000 | 69.0 | 9.27% | 2268.5 | 4.73% | motif file (matrix) |
svg |
41 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.469e+01 | 0.0000 | 45.0 | 6.05% | 1265.1 | 2.64% | motif file (matrix) |
svg |
42 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.406e+01 | 0.0000 | 34.0 | 4.57% | 844.5 | 1.76% | motif file (matrix) |
svg |
43 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-6 | -1.402e+01 | 0.0000 | 39.0 | 5.24% | 1046.9 | 2.18% | motif file (matrix) |
svg |
44 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.388e+01 | 0.0000 | 49.0 | 6.59% | 1478.3 | 3.08% | motif file (matrix) |
svg |
45 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 38.0 | 5.11% | 1020.3 | 2.13% | motif file (matrix) |
svg |
46 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.280e+01 | 0.0000 | 43.0 | 5.78% | 1273.2 | 2.65% | motif file (matrix) |
svg |
47 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.263e+01 | 0.0000 | 24.0 | 3.23% | 517.3 | 1.08% | motif file (matrix) |
svg |
48 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-5 | -1.191e+01 | 0.0001 | 49.0 | 6.59% | 1590.8 | 3.32% | motif file (matrix) |
svg |
49 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-5 | -1.173e+01 | 0.0001 | 131.0 | 17.61% | 5804.9 | 12.10% | motif file (matrix) |
svg |
50 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.154e+01 | 0.0001 | 14.0 | 1.88% | 214.5 | 0.45% | motif file (matrix) |
svg |
51 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -1.142e+01 | 0.0001 | 41.0 | 5.51% | 1259.9 | 2.63% | motif file (matrix) |
svg |
52 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-4 | -1.076e+01 | 0.0001 | 35.0 | 4.70% | 1032.6 | 2.15% | motif file (matrix) |
svg |
53 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.050e+01 | 0.0002 | 24.0 | 3.23% | 590.1 | 1.23% | motif file (matrix) |
svg |
54 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -9.305e+00 | 0.0006 | 33.0 | 4.44% | 1022.0 | 2.13% | motif file (matrix) |
svg |
55 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.497e+00 | 0.0014 | 125.0 | 16.80% | 5896.4 | 12.30% | motif file (matrix) |
svg |
56 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.065e+00 | 0.0020 | 51.0 | 6.85% | 1965.4 | 4.10% | motif file (matrix) |
svg |
57 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.923e+00 | 0.0023 | 109.0 | 14.65% | 5081.4 | 10.60% | motif file (matrix) |
svg |
58 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.767e+00 | 0.0027 | 66.0 | 8.87% | 2764.2 | 5.76% | motif file (matrix) |
svg |
59 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.754e+00 | 0.0027 | 15.0 | 2.02% | 345.7 | 0.72% | motif file (matrix) |
svg |
60 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.349e+00 | 0.0039 | 47.0 | 6.32% | 1827.4 | 3.81% | motif file (matrix) |
svg |
61 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.228e+00 | 0.0043 | 52.0 | 6.99% | 2092.3 | 4.36% | motif file (matrix) |
svg |
62 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -6.994e+00 | 0.0054 | 55.0 | 7.39% | 2270.6 | 4.73% | motif file (matrix) |
svg |
63 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.860e+00 | 0.0061 | 56.0 | 7.53% | 2336.1 | 4.87% | motif file (matrix) |
svg |
64 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.835e+00 | 0.0061 | 237.0 | 31.85% | 12817.5 | 26.73% | motif file (matrix) |
svg |
65 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.806e+00 | 0.0062 | 6.0 | 0.81% | 73.6 | 0.15% | motif file (matrix) |
svg |
66 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.754e+00 | 0.0064 | 66.0 | 8.87% | 2877.0 | 6.00% | motif file (matrix) |
svg |
67 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.588e+00 | 0.0075 | 7.0 | 0.94% | 104.6 | 0.22% | motif file (matrix) |
svg |
68 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-2 | -6.573e+00 | 0.0075 | 59.0 | 7.93% | 2525.0 | 5.27% | motif file (matrix) |
svg |
69 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.218e+00 | 0.0105 | 82.0 | 11.02% | 3820.2 | 7.97% | motif file (matrix) |
svg |
70 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.015e+00 | 0.0127 | 33.0 | 4.44% | 1243.3 | 2.59% | motif file (matrix) |
svg |
71 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.866e+00 | 0.0145 | 44.0 | 5.91% | 1814.4 | 3.78% | motif file (matrix) |
svg |
72 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.823e+00 | 0.0150 | 6.0 | 0.81% | 89.3 | 0.19% | motif file (matrix) |
svg |
73 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.615e+00 | 0.0182 | 64.0 | 8.60% | 2911.1 | 6.07% | motif file (matrix) |
svg |
74 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.421e+00 | 0.0218 | 53.0 | 7.12% | 2339.5 | 4.88% | motif file (matrix) |
svg |
75 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.330e+00 | 0.0235 | 80.0 | 10.75% | 3841.7 | 8.01% | motif file (matrix) |
svg |
76 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.227e+00 | 0.0257 | 51.0 | 6.85% | 2255.1 | 4.70% | motif file (matrix) |
svg |
77 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.929e+00 | 0.0342 | 12.0 | 1.61% | 336.6 | 0.70% | motif file (matrix) |
svg |
78 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.908e+00 | 0.0345 | 15.0 | 2.02% | 467.3 | 0.97% | motif file (matrix) |
svg |
79 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.878e+00 | 0.0351 | 30.0 | 4.03% | 1191.0 | 2.48% | motif file (matrix) |
svg |
80 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -4.837e+00 | 0.0361 | 39.0 | 5.24% | 1661.7 | 3.46% | motif file (matrix) |
svg |
81 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.768e+00 | 0.0382 | 221.0 | 29.70% | 12354.7 | 25.76% | motif file (matrix) |
svg |
82 |
| CHR(?)/Hela-CellCycle-Expression/Homer | 1e-2 | -4.700e+00 | 0.0404 | 43.0 | 5.78% | 1889.2 | 3.94% | motif file (matrix) |
svg |