Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_undef_E2F1_SRX335246_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 12
Total background sequences = 61000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T 1e-10-2.390e+0133.33%0.05%19.0bp (25.2bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.573)
More Information | Similar Motifs Found
motif file (matrix)
2 * A C G T C G T A C T A G C G T A A C T G C G A T C T G A C G T A C T G A C T G A A G T C C G T A C T A G C T G A C G T A C T A G 1e-8-1.945e+0133.33%0.17%32.1bp (29.0bp)bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer(0.584)
More Information | Similar Motifs Found
motif file (matrix)
3 * C G T A G C T A A C G T A C G T C G A T A G C T C G T A G C T A A C G T A T G C C G T A C T G A G C T A C G T A A C G T A C G T 1e-8-1.883e+0125.00%0.03%14.7bp (33.1bp)PB0001.1_Arid3a_1/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T C G A T A T C G A C G T A G C T A G C T A C G T G T C A A G T C A C G T C G T A A C T G A C G T 1e-7-1.833e+0125.00%0.04%12.6bp (25.3bp)PH0040.1_Hmbox1/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A C T G A C G T A G T C A G T C A G C T A C G T A G C T A G C T T A G C A G T C A G T C A G C T 1e-7-1.614e+0125.00%0.08%34.3bp (33.3bp)RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer(0.770)
More Information | Similar Motifs Found
motif file (matrix)
6 * G A C T C G T A A C G T C G T A A G C T A C G T A G T C C G T A C T A G A T C G G T C A C G T A C G T A 1e-6-1.603e+0125.00%0.08%16.8bp (30.4bp)PB0170.1_Sox17_2/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T C T G A G T A C C G T A G A C T A C T G A C T G C T A G A G C T A G T C A G C T A C G T C T A G 1e-6-1.594e+0133.33%0.40%29.6bp (35.5bp)Sox1/MA0870.1/Jaspar(0.589)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G 1e-6-1.539e+0141.67%1.23%18.1bp (32.5bp)DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.573)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A 1e-6-1.492e+0116.67%0.01%23.3bp (58.9bp)NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A C T A G C G T A C G T A C T A G C T G A A G C T C G T A A C G T A T C G G T A C C G T A A G T C 1e-6-1.469e+0133.33%0.54%27.0bp (32.9bp)MEF2C/MA0497.1/Jaspar(0.549)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A C T G A C T G A C G T C G T A C G T A A G C T C T A G A G T C A G T C 1e-6-1.455e+0116.67%0.01%22.0bp (23.3bp)NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
12 * G T C A C T G A C T G A C A G T C G A T C G T A A C G T C G T A A G C T G T C A G A T C C G A T A C G T 1e-6-1.401e+0125.00%0.16%26.0bp (33.9bp)SD0003.1_at_AC_acceptor/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)
13 * G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C 1e-6-1.392e+0133.33%0.66%17.2bp (34.6bp)PB0166.1_Sox12_2/Jaspar(0.552)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G 1e-5-1.355e+0125.00%0.18%32.6bp (35.0bp)Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer(0.616)
More Information | Similar Motifs Found
motif file (matrix)
15 * C A G T C T G A C G T A C G T A C G T A C G T A A T G C A C G T G T A C G A C T T C A G C G T A C G T A C A T G C T A G T C G A 1e-5-1.162e+0116.67%0.04%1.5bp (29.9bp)PB0135.1_Hoxa3_2/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
16 * T C G A A G T C A T G C A G T C A G T C G T A C C G A T C G T A T A C G C T A G C T G A T G A C A T G C 1e-5-1.155e+0125.00%0.36%25.2bp (34.0bp)GLIS3/MA0737.1/Jaspar(0.679)
More Information | Similar Motifs Found
motif file (matrix)
17 * C T G A A T G C G A T C C G T A A T C G A C T G G T A C C T G A C T A G A T G C C G A T C G T A A T G C 1e-4-1.121e+0116.67%0.05%15.5bp (27.4bp)SD0002.1_at_AC_acceptor/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
18 * T C G A G A T C A T G C A T C G A T C G C T A G A C G T T A G C A G T C A C G T A T G C A G T C A C G T G C A T C G A T T A C G 1e-3-8.830e+0025.00%0.89%5.7bp (35.1bp)PB0083.1_Tcf7_1/Jaspar(0.493)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A G T C 1e-3-8.679e+008.33%0.00%25.3bp (19.2bp)YY2/MA0748.1/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A G T C A G T C A G T C A C T G A C G T A G T C A G T C A C G T A C T G 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C G T A C G T A A C T G A C G T 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)NFYA/MA0060.2/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
22 * T A G C G T C A C A G T G C T A C A T G C G T A T A G C A T C G A G T C A C G T C A T G T C G A T G C A 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)Mafb/MA0117.2/Jaspar(0.527)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G C G T A A C T G C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T C G T A 1e-3-8.679e+008.33%0.00%0.0bp (10.0bp)PB0172.1_Sox1_2/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C 1e-3-8.679e+008.33%0.00%31.0bp (0.0bp)ZNF354C/MA0130.1/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
25 * C G T A C G T A A C T G A G T C C G T A A C T G A G T C C G T A A G T C A C G T A C T G A G T C A C G T A G T C C G T A A C T G 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)PB0099.1_Zfp691_1/Jaspar(0.608)
More Information | Similar Motifs Found
motif file (matrix)
26 * A G T C C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C T G C G T A A G T C C G T A 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)PB0026.1_Gm397_1/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G C G T A C G T A A G T C A C G T A C G T A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G T C A C T G C G T A 1e-3-8.679e+008.33%0.00%0.0bp (0.0bp)Nkx2-5(var.2)/MA0503.1/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C T G A G T C A C G T 1e-3-7.986e+008.33%0.00%0.0bp (0.0bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.571)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T 1e-3-7.986e+008.33%0.00%0.0bp (38.5bp)PB0028.1_Hbp1_1/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C T G A C T G A G T C 1e-3-7.986e+008.33%0.00%0.0bp (17.1bp)PB0128.1_Gcm1_2/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G 1e-3-7.986e+008.33%0.00%0.0bp (7.4bp)Klf1/MA0493.1/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G 1e-3-7.986e+008.33%0.00%0.0bp (0.0bp)BATF::JUN/MA0462.1/Jaspar(0.580)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C G T C G T A C G T A A G T C C G T A A G T C A G T C C G T A A G T C A C G T 1e-3-7.070e+008.33%0.01%0.0bp (32.7bp)Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A G T C 1e-3-7.070e+008.33%0.01%0.0bp (35.6bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.716)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C G T A C T G A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C 1e-2-6.734e+008.33%0.01%0.0bp (26.0bp)PH0037.1_Hdx/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
36 * G C T A T C G A C T A G C T A G T A C G C G A T G T A C C G T A C T G A T C A G A C T G T C A G T A G C G T C A G T C A C T A G 1e-2-6.320e+0016.67%0.53%40.5bp (33.5bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.644)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C 1e-2-5.018e+008.33%0.06%0.0bp (34.3bp)Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer(0.697)
More Information | Similar Motifs Found
motif file (matrix)
38 * A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T C G T A A C G T 1e0-1.176e-0166.67%77.47%7.9bp (33.1bp)PB0096.1_Zfp187_1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)