Homer de novo Motif Results (hs_CervicalCarcinoma_HeLaS3_Cancer_P250_SRX100500_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 920
Total background sequences = 46687
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G A G T C C T G A T G C A A C G T A C T G T G C A A T G C G A C T T G A C C G T A A C G T A C T G 1e-59-1.381e+0213.26%1.97%27.2bp (29.5bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.978)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C G T A C A C T G C A T G T C G A C G T A C T A G G A C T C T A G T C G A 1e-21-5.011e+0111.41%3.85%24.7bp (31.1bp)Gabpa/MA0062.2/Jaspar(0.942)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T C A G T A T G C A G C T A C T G T C G A A G T C A C G T T A G C G C T A C G A T C T A G T G C A C G T A A C G T C T A G 1e-18-4.208e+010.87%0.00%17.9bp (3.4bp)PB0178.1_Sox8_2/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C A C G T G T A C C T A G A C T G A G T C A G T C C T G A A T C G A C G T A C G T A T G C A G T C 1e-14-3.392e+011.41%0.05%21.7bp (40.9bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
5 G T C A A C G T A G C T C T A G A G T C G T A C C G T A A C T G A T G C C G T A A C G T A C G T A G T C 1e-14-3.333e+010.87%0.01%18.6bp (5.0bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
6 G T C A G C T A T C A G G C T A A G C T C T A G C A T G G T A C A C T G C T A G 1e-14-3.251e+015.98%1.73%25.4bp (33.5bp)YY1(Zf)/Promoter/Homer(0.917)
More Information | Similar Motifs Found
motif file (matrix)
7 A T C G C G T A C T G A C G T A C A T G C T A G G T A C A G T C C G T A T G A C G T C A C G A T A G C T 1e-13-3.115e+011.52%0.08%29.8bp (30.6bp)NR4A2/MA0160.1/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
8 A G C T A G C T A C G T A G T C G A C T A C T G G T A C T G A C T A G C C G T A A T C G T A C G G C T A T A C G G A C T A C G T 1e-12-2.885e+012.07%0.21%25.2bp (29.3bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.668)
More Information | Similar Motifs Found
motif file (matrix)
9 C G T A A C T G A T G C A C G T A T C G A T G C A C G T A T G C A T G C A C G T A G T C G T A C G C A T A T C G G T A C A T C G 1e-12-2.811e+011.52%0.09%25.5bp (33.6bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.596)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A T C G G A C T A C T G C T A G G A T C C A G T A T G C G A T C T C A G 1e-10-2.500e+017.50%3.02%25.3bp (33.2bp)POL013.1_MED-1/Jaspar(0.762)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A T G C G T A C A C G T A G T C T A G C C G A T C G A T A G T C A G T C G A T C T C A G A G C T 1e-10-2.400e+011.41%0.11%24.8bp (29.7bp)MF0001.1_ETS_class/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
12 * A T G C T A G C A C T G A G T C A T G C T C A G A G C T T G C A C G T A C G T A 1e-9-2.149e+011.85%0.25%26.1bp (33.4bp)YY2/MA0748.1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G A T A C T G A C G T A C G T G T C A A C G T A C T G A T G C C G A T A T C G A G C T C A G T A G T C 1e-9-2.144e+011.20%0.08%19.8bp (27.8bp)PB0121.1_Foxj3_2/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T A G A G T C C A G T A C T G G T A C C G A T C G T A A C G T C G A T G T C A 1e-9-2.111e+012.39%0.46%28.8bp (30.2bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.654)
More Information | Similar Motifs Found
motif file (matrix)
15 * A T G C T A C G A T C G A G T C G A T C A C T G A G T C C G A T A C T G A C T G A G C T A T C G T C G A 1e-9-2.101e+010.54%0.00%8.0bp (27.1bp)PB0003.1_Ascl2_1/Jaspar(0.659)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T C A T C G A T G C A A T G C C G T A A T C G T A G C G T C A C G A T C G A T 1e-8-2.020e+011.74%0.24%27.1bp (30.0bp)Foxo1/MA0480.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
17 * T A G C A T C G T C G A A C G T A C G T G T A C G T A C A C G T A C G T A C G T 1e-8-2.010e+011.30%0.12%25.3bp (28.1bp)SPIB/MA0081.1/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T 1e-8-1.892e+010.43%0.00%29.7bp (2.8bp)REL/MA0101.1/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A C G T A C T G A C G T A A C G T A C T G C T G A A G T C C G T A A T G C 1e-8-1.884e+011.20%0.11%22.3bp (30.3bp)PH0164.1_Six4/Jaspar(0.751)
More Information | Similar Motifs Found
motif file (matrix)
20 * G T C A A G T C A C G T A C G T A C G T A C G T A C T G A G T C G T C A C T A G 1e-7-1.784e+010.98%0.07%21.7bp (24.3bp)PB0145.1_Mafb_2/Jaspar(0.631)
More Information | Similar Motifs Found
motif file (matrix)
21 * T G C A T G C A A G T C A T G C T A C G T A G C A T C G G A T C A C T G A T C G C T A G A T C G T G A C G C A T A T C G A T G C 1e-6-1.484e+011.85%0.40%20.8bp (30.9bp)PB0199.1_Zfp161_2/Jaspar(0.598)
More Information | Similar Motifs Found
motif file (matrix)