Information for 11-GGCTTTCCCCGGT (Motif 18)

A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
Reverse Opposite:
T C G A A G T C A G T C A C T G A C T G A C T G A C T G G T C A C G T A C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 29.7bp
Average Position of motif in Background37.0 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCTTTCCCCGGT
GGGGATTTCC-----
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTCCCCGGT
GGGGATTCCCCC--
 A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCTTTCCCCGGT
NGGGGATTTCCC----
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGCTTTCCCCGGT
-----TCCCCA--
 A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCTTTCCCCGGT
GGGAATTTCC-----
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCTTTCCCCGGT
GGGGATTTCC-----
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGCTTTCCCCGGT
--HTTTCCCASG-
 A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTTTCCCCGGT
AGGGGATTCCCCT--
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTCCCCGGT
KGCCCTTCCCCA--
 A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCTTTCCCCGGT-
----TGCCCAGNHW
 A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A