NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_RAD21_SRX361892	number of peaks	24105
antibody	RAD21
cell line	LOVO	Number of reads	23885354
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	9450
MYC	2421
MYCN	2126
Tcf12	1783
TCF4	1429
SP1	1410
ZEB1	1261
NFIC	1253
TAL1::TCF3	1173
NR2F1	1042
MYBL1	977
TCF3	910
Sox2	875
RUNX1	787
STAT3	749
ZBTB7A	723
RUNX3	709
MAX	642
FOXA1	638
Gabpa	606
ERG	604
E2F4	585
ZNF740	567
Esrrg	553
ELF1	545
YY1	537
TFAP2A	521
TFAP2C	496
TFAP2A-var.2	480
MAX::MYC	471
TEAD4	460
Foxa2	439
E2F1	434
Rxra	411
NR1H2::RXRA	408
GATA3	403
Arid3a	398
EGR1	390
Pparg::Rxra	390
TFAP4	383
BHLHE41	362
Gata1	338
NEUROD1	332
ELK1	332
EGR2	322
ZNF263	316
FOS	313
Hnf4a	305
Ar	303
NFKB1	296
OTX2	294
CEBPB	292
Nr1h3::Rxra	282
TEAD1	279
KLF4	276
PBX1	273
Gata4	265
USF1	247
USF2	242
GATA2	242
EBF1	239
TFAP2A-var.3	237
Esrra	225
BATF::JUN	218
Tcf21	216
ETS1	215
E2F6	211
STAT1::STAT2	209
SOX9	208
FOSL2	204
THAP1	199
BHLHE40	198
TCF7L2	197
ELF3	197
REL	194
RELA	191
GATA5	188
Foxj2	186
NRF1	183
FOSL1	182
Atf3	177
KLF5	177
PAX5	175
Tcf7	171
JUND	169
NKX3-2	166
NFIA	164
POU5F1B	163
CEBPD	161
SPI1	156
JUN	156
CEBPA	149
E2F3	146
FLI1	144
CDX2	142
KLF9	135
FOS::JUN	131
Pou5f1::Sox2	130
NFKB2	130
PDX1	128
Mafb	128
ETV1	127
MAFK	125
Arnt	123
SMAD2::SMAD3::SMAD4	117
Foxo1	114
TP63	112
Hand1::Tcf3	112
CREB1	111
EOMES	104
TEAD2	102
STAT1	101
HNF4G	101
Klf1	99
ARNT::HIF1A	96
HSF1	95
ETV6	95
BCL6B	93
FOXP1	85
Vdr	85
RARA::RXRA	84
MEF2B	84
ETV3	83
SP3	83
ELK4	82
MYBL2	81
SP4	80
RUNX2	79
Atf1	79
HEY1	78
Stat5a::Stat5b	72
Gfi1b	69
TFDP1	67
MYB	67
Bcl6	67
NFE2	63
MAFF	63
ELK3	62
TP53	61
MEF2A	60
NFATC3	59
GATA1::TAL1	59
KLF13	57
Nkx3-1	57
ERF	55
Bach1::Mafk	51
MAF::NFE2	50
SNAI2	49
FEV	49
JUNB	48
SRF	48
NFIL3	48
BATF3	47
NR3C2	46
ZBTB18	46
MAFG	46
NR4A2	46
ZNF143	45
SCRT1	44
Ahr::Arnt	43
Nfe2l2	43
PRDM1	40
POU2F2	38
TBX1	37
ATF4	36
IRF1	35
Hic1;	35
SPIB	35
EGR4	35
NFYB	32
FOXP3	30
REST	29
RXRG	29
FOXH1	28
HNF1B	28
NFYA	27
Ddit3::Cebpa	26
RXRB	26
Dux	25
HINFP	25
PPARG	24
DUX4	22
NFATC1	22
NR3C1	21
ELF5	20
RFX5	20
SP2	20
EGR3	19
Mecom	19
SREBF2	18
Arntl	17
GRHL1	16
TP73	16
Srebf1(var.2)	15
GLI2	15
Gmeb1	14
Sox17	14
RXRA::VDR	14
XBP1	14
SREBF1	13
MEIS1	12
Nr5a2	10
Rarg	10
NR2C2	9
Ascl2	9
MEF2D	9
LEF1	9
PROX1	8
RARA	7
ETV4	7
Rarb	7
GMEB2	7
HOXA13	7
BARX1	6
CREB3L1	6
TBX19	5
Pax6	5
RORA(var.2)	5
RORA	5
HNF1A	4
MAFG::NFE2L1	4
CLOCK	4
Hoxa9	3
MIXL1	3
SMAD3	3
E2F8	2
Creb3l2	2
ZBTB33	2
TFE3	2
NKX2-3	1
Arx	1
CREB3	1
Hes1	1
HOXD13	1
Pitx1	1
FOXO4	1
RFX2	1
FOS::JUND	1
Alx4	1
Rfx1	1

Motif name

Number of overlap

9450

2421

2126

1783

1429