NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_RAD21_SRX361886	number of peaks	22076
antibody	RAD21
cell line	LOVO	Number of reads	6859448
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	6814
MYC	1959
MYCN	1704
Tcf12	1444
TCF4	1185
ZEB1	1068
SP1	1027
TAL1::TCF3	975
NFIC	940
NR2F1	769
TCF3	755
MYBL1	680
Sox2	635
RUNX1	537
ZBTB7A	534
STAT3	503
RUNX3	492
MAX	471
ZNF740	462
FOXA1	420
Gabpa	411
ERG	409
TFAP2C	401
E2F4	395
TFAP2A	394
Esrrg	391
ELF1	362
TFAP2A-var.2	353
YY1	345
MAX::MYC	337
E2F1	320
TEAD4	315
NR1H2::RXRA	300
TFAP4	296
Pparg::Rxra	292
EGR1	279
BHLHE41	278
Foxa2	276
Rxra	270
GATA3	265
NEUROD1	259
ZNF263	251
Arid3a	237
EGR2	234
Gata1	232
CEBPB	230
NFKB1	228
Ar	225
ELK1	218
FOS	208
Nr1h3::Rxra	199
OTX2	197
USF2	196
KLF4	196
PBX1	193
USF1	184
Hnf4a	182
TEAD1	176
EBF1	167
THAP1	166
Gata4	165
GATA2	164
TFAP2A-var.3	159
Tcf21	156
E2F6	153
Esrra	151
PAX5	150
BHLHE40	150
STAT1::STAT2	149
SOX9	144
BATF::JUN	144
TCF7L2	142
FOSL2	141
ETS1	136
NFIA	130
NKX3-2	126
ELF3	126
REL	124
NRF1	123
Foxj2	122
FOSL1	122
Tcf7	121
JUND	121
KLF5	121
RELA	120
CEBPD	120
POU5F1B	120
Atf3	116
GATA5	115
SMAD2::SMAD3::SMAD4	112
PDX1	109
CEBPA	106
KLF9	105
JUN	103
SPI1	100
Mafb	98
E2F3	97
FLI1	96
Hand1::Tcf3	93
Arnt	93
FOS::JUN	89
EOMES	88
NFKB2	84
MAFK	84
Klf1	83
TP63	82
Pou5f1::Sox2	80
ETV1	79
HSF1	77
SP3	75
BCL6B	75
ARNT::HIF1A	73
SP4	71
STAT1	71
CDX2	70
Foxo1	70
RARA::RXRA	69
CREB1	68
HNF4G	67
RUNX2	65
HEY1	63
TEAD2	63
Bcl6	63
ETV6	62
Vdr	62
MYB	60
NFE2	58
FOXP1	55
MYBL2	54
GATA1::TAL1	53
Stat5a::Stat5b	51
MAFF	50
Gfi1b	49
MAF::NFE2	48
MEF2B	47
MAFG	47
Atf1	47
ETV3	45
Bach1::Mafk	43
Nfe2l2	43
Nkx3-1	43
FEV	40
TP53	39
Ahr::Arnt	38
MEF2A	38
PRDM1	38
ELK4	38
SCRT1	37
SNAI2	36
ZBTB18	36
NR3C2	36
NFATC3	35
IRF1	35
SRF	34
KLF13	33
NFIL3	33
ZNF143	31
ATF4	31
ELK3	31
JUNB	31
TFDP1	30
NR4A2	30
EGR4	29
SPIB	25
Hic1;	24
BATF3	23
POU2F2	23
NFYB	23
TBX1	22
Ddit3::Cebpa	22
REST	22
ERF	21
FOXH1	19
Dux	19
NFYA	19
HNF1B	19
PPARG	18
GLI2	17
FOXP3	17
SREBF2	14
EGR3	13
SP2	13
NR3C1	13
HINFP	13
GRHL1	13
RXRB	12
DUX4	12
RXRG	12
RFX5	12
NFATC1	12
ELF5	12
RXRA::VDR	11
NR2C2	11
Arntl	11
SREBF1	10
MEIS1	9
Srebf1(var.2)	9
XBP1	9
TP73	9
MEF2D	8
Nr5a2	8
Sox17	8
Mecom	7
CREB3L1	7
Gmeb1	7
Rarg	7
Ascl2	6
ETV4	5
Rarb	4
TBX19	4
MAFG::NFE2L1	4
RORA	4
BARX1	4
RORA(var.2)	4
PROX1	3
RARA	3
MIXL1	3
CREB3	3
NFIC::TLX1	3
SMAD3	3
GMEB2	3
HOXA13	3
CLOCK	2
Pax6	2
Creb3l2	2
FOXO4	2
ZBTB33	2
Alx4	1
TFE3	1
HNF1A	1
FOS::JUND	1
LEF1	1
Hoxa11	1

Motif name

Number of overlap

6814

1959

1704

1444

1185