NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_RAD21_SRX360017	number of peaks	25032
antibody	RAD21
cell line	LOVO	Number of reads	22649474
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	6037
MYC	1686
MYCN	1479
Tcf12	1232
TCF4	998
SP1	931
ZEB1	920
NFIC	873
TAL1::TCF3	858
NR2F1	831
TCF3	697
Sox2	687
MYBL1	637
FOXA1	611
RUNX1	539
MAX	513
STAT3	510
ZBTB7A	485
RUNX3	473
ERG	450
Gabpa	422
Esrrg	413
Foxa2	388
ELF1	382
ZNF740	374
TFAP2A	373
YY1	363
GATA3	358
MAX::MYC	342
TEAD4	341
E2F4	338
Ar	338
Pparg::Rxra	330
TFAP2C	328
Rxra	312
NR1H2::RXRA	312
Gata1	312
TFAP2A-var.2	302
FOS	287
TFAP4	282
EGR1	277
Hnf4a	272
BHLHE41	267
Arid3a	266
E2F1	257
NEUROD1	255
CEBPB	253
KLF4	232
Gata4	230
ZNF263	227
PBX1	226
Esrra	226
GATA2	226
NFKB1	225
OTX2	209
ELK1	202
BATF::JUN	200
TEAD1	199
EGR2	195
FOSL2	192
USF2	192
GATA5	187
EBF1	184
Nr1h3::Rxra	180
SOX9	179
ELF3	178
STAT1::STAT2	168
USF1	167
Tcf21	164
TCF7L2	163
SPI1	162
FOSL1	156
JUND	154
Atf3	151
JUN	150
KLF5	148
RELA	148
ETS1	146
E2F6	146
Tcf7	144
REL	142
PAX5	138
CEBPD	136
NKX3-2	134
BHLHE40	131
POU5F1B	129
FOS::JUN	126
Foxj2	125
THAP1	125
CEBPA	124
PDX1	120
NFIA	117
FLI1	115
CDX2	112
TFAP2A-var.3	111
KLF9	108
NFKB2	104
MAFK	104
Pou5f1::Sox2	101
Mafb	100
TP63	100
NRF1	97
HNF4G	95
Foxo1	91
HSF1	88
SMAD2::SMAD3::SMAD4	88
CREB1	87
Hand1::Tcf3	87
HEY1	87
Arnt	85
ETV1	80
EOMES	79
BCL6B	76
ETV6	76
RUNX2	76
E2F3	75
Klf1	75
FOXP1	72
NFE2	70
GATA1::TAL1	70
SP3	70
TEAD2	66
ARNT::HIF1A	65
TFDP1	64
Vdr	64
RARA::RXRA	63
MEF2B	63
STAT1	62
MAFF	62
FEV	61
NR3C2	60
MYBL2	59
NR4A2	57
ELK4	57
Gfi1b	57
MAF::NFE2	56
Atf1	56
Nfe2l2	55
MAFG	54
Bcl6	54
SPIB	53
ETV3	51
SP4	48
Stat5a::Stat5b	48
PRDM1	47
MYB	47
IRF1	47
Bach1::Mafk	44
SRF	42
ERF	41
NFATC3	41
Nkx3-1	40
ZNF143	40
MEF2A	39
NFIL3	37
TP53	37
Ahr::Arnt	37
Srebf1(var.2)	36
SCRT1	36
JUNB	34
ZBTB18	33
ATF4	31
Hic1;	31
EGR4	31
TBX1	30
KLF13	30
SNAI2	29
RXRB	29
RXRG	28
BATF3	28
ELK3	26
POU2F2	26
Mecom	25
NFYB	24
PPARG	24
Ddit3::Cebpa	23
FOXP3	22
Dux	22
REST	22
RFX5	20
NFYA	19
DUX4	19
Gmeb1	19
FOXH1	18
TP73	17
NFATC1	16
HNF1B	16
CREB3L1	16
NR3C1	16
GRHL1	16
Arntl	14
HINFP	13
Sox17	13
RXRA::VDR	13
NR2C2	13
EGR3	12
SREBF1	11
ETV4	11
Rarg	11
XBP1	10
SP2	10
MAFG::NFE2L1	9
Ascl2	9
Rarb	9
SREBF2	8
BARX1	8
GMEB2	8
ELF5	8
RORA(var.2)	8
Pax6	7
MEF2D	7
HOXA13	6
MEIS1	5
GLI2	5
Arx	4
Klf12	4
RORA	4
CREB3	4
RARA	4
TBX19	4
FOS::JUNB	3
Nr5a2	3
Alx4	3
HOXA5	3
HNF1A	3
Creb3l2	3
Hoxa9	3
SMAD3	3
LEF1	3
RFX2	2
FOS::JUND	2
NKX2-3	2
ZBTB33	2
FOXO4	2
NFAT5	2
CLOCK	2
IRF2	1
Id2	1
Hoxa11	1
E2F8	1
MIXL1	1
Hes1	1
PROX1	1
TFE3	1
LMX1B	1
NFIC::TLX1	1
Rfx1	1

Motif name

Number of overlap

6037

1686

1479

1232

998