NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_RAD21_SRX359878	number of peaks	19619
antibody	RAD21
cell line	LOVO	Number of reads	10862870
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	5327
MYC	1547
MYCN	1365
Tcf12	1160
TCF4	987
SP1	924
ZEB1	895
TAL1::TCF3	801
NFIC	794
NR2F1	664
TCF3	654
Sox2	523
MYBL1	513
RUNX1	491
ZBTB7A	478
RUNX3	427
MAX	427
STAT3	422
E2F4	418
ZNF740	389
Gabpa	362
TFAP2A-var.2	354
TFAP2A	353
ERG	351
Esrrg	347
TFAP2C	343
E2F1	342
FOXA1	318
YY1	298
ELF1	290
EGR1	288
MAX::MYC	288
TEAD4	272
Pparg::Rxra	257
NR1H2::RXRA	255
TFAP4	255
EGR2	253
Rxra	247
BHLHE41	245
Foxa2	225
NEUROD1	221
ZNF263	221
GATA3	206
Ar	201
KLF4	200
Gata1	189
Arid3a	185
ELK1	185
Nr1h3::Rxra	184
NFKB1	179
Hnf4a	179
CEBPB	164
USF2	164
TEAD1	162
OTX2	160
THAP1	155
STAT1::STAT2	149
PBX1	149
TFAP2A-var.3	147
E2F6	146
USF1	143
EBF1	141
POU5F1B	141
Esrra	141
BHLHE40	135
Tcf21	135
PAX5	134
SOX9	133
FOS	131
KLF5	127
Gata4	127
KLF9	127
NRF1	120
NFIA	119
GATA2	119
NKX3-2	116
E2F3	113
ELF3	111
ETS1	111
SPI1	104
BATF::JUN	103
Foxj2	101
CEBPD	101
TCF7L2	100
FLI1	99
RELA	97
FOSL2	95
REL	93
SMAD2::SMAD3::SMAD4	92
Atf3	91
CEBPA	89
Tcf7	86
Arnt	86
GATA5	84
FOSL1	81
PDX1	81
Klf1	77
SP3	77
JUN	76
Hand1::Tcf3	73
NFKB2	71
MAFK	70
Pou5f1::Sox2	70
Mafb	69
JUND	69
ARNT::HIF1A	68
CDX2	68
RUNX2	67
EOMES	66
STAT1	64
TEAD2	64
ETV1	64
RARA::RXRA	63
TP63	63
BCL6B	61
HEY1	61
Foxo1	60
HNF4G	59
TFDP1	59
HSF1	57
SP4	56
Vdr	55
FOS::JUN	53
CREB1	51
Bcl6	48
FOXP1	48
ETV3	48
Atf1	44
ETV6	44
Stat5a::Stat5b	44
MEF2B	42
KLF13	40
ELK4	40
MAFF	40
SCRT1	39
SNAI2	38
NFE2	38
NR3C2	36
TP53	36
MYB	35
SPIB	34
Gfi1b	34
NFATC3	34
Bach1::Mafk	33
Nkx3-1	33
ELK3	32
FEV	32
Nfe2l2	31
Ahr::Arnt	30
PRDM1	30
MAFG	30
EGR4	30
MEF2A	30
ZNF143	29
MAF::NFE2	28
MYBL2	28
NR4A2	28
Hic1;	26
NFIL3	25
ERF	25
JUNB	25
GATA1::TAL1	24
REST	23
SRF	23
TBX1	22
FOXH1	21
ZBTB18	20
IRF1	20
POU2F2	20
NFYB	19
BATF3	18
PPARG	17
Ddit3::Cebpa	17
SP2	17
ATF4	16
NFYA	15
GLI2	15
EGR3	14
HINFP	14
FOXP3	14
RFX5	13
RXRB	13
RXRG	13
TP73	12
Dux	12
HNF1B	12
XBP1	11
SREBF1	11
NR3C1	11
SREBF2	11
ELF5	11
Arntl	10
Mecom	10
NFATC1	10
Srebf1(var.2)	9
RXRA::VDR	8
DUX4	8
NR2C2	8
GRHL1	8
Gmeb1	8
Ascl2	8
Sox17	8
MEIS1	7
Tcfl5	6
Rarg	5
CREB3L1	5
MAFG::NFE2L1	5
GMEB2	4
HNF1A	4
Nr5a2	4
MEF2D	4
SMAD3	4
Pax6	4
RARA	3
RORA(var.2)	3
TBX19	3
Rarb	3
ETV4	3
LEF1	3
ZBTB33	3
PROX1	2
BARX1	2
HOXA13	2
Creb3l2	2
Hoxa9	2
HOXA5	2
RORA	2
CLOCK	2
MIXL1	1
HES5	1
E2F8	1
IRF2	1
MTF1	1
FOS::JUND	1
TFE3	1
Id2	1
Klf12	1
Hoxa11	1
Alx4	1
FOS::JUNB	1
RFX2	1
Hes1	1
FOXO4	1

Motif name

Number of overlap

5327

1547

1365

1160

987