NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_RAD21_SRX359858	number of peaks	5631
antibody	RAD21
cell line	LOVO	Number of reads	4447527
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
CTCF	1076
MYC	333
MYCN	276
Tcf12	272
ZEB1	208
NFIC	197
TCF4	185
TAL1::TCF3	184
SP1	175
Sox2	167
TCF3	148
MYBL1	140
NR2F1	138
RUNX1	117
RUNX3	100
ZBTB7A	97
STAT3	95
FOXA1	86
MAX	82
Esrrg	75
TEAD4	70
ERG	70
Gabpa	69
YY1	68
E2F4	68
TFAP2A	66
ZNF740	62
ELF1	62
NR1H2::RXRA	61
Foxa2	60
Ar	57
Pparg::Rxra	55
GATA3	55
TFAP2C	55
NEUROD1	53
TFAP4	52
BHLHE41	50
MAX::MYC	48
TFAP2A-var.2	48
FOS	47
ZNF263	46
EGR1	46
NFKB1	46
Rxra	46
Hnf4a	45
SOX9	44
CEBPB	43
Gata1	42
ELK1	41
Arid3a	41
TEAD1	40
EGR2	40
E2F1	39
Nr1h3::Rxra	38
OTX2	37
USF1	37
PBX1	36
THAP1	36
STAT1::STAT2	35
RELA	34
GATA2	33
Tcf21	31
BHLHE40	30
USF2	29
SPI1	29
BATF::JUN	29
FOSL1	29
EBF1	29
Gata4	28
FOSL2	27
Esrra	27
Pou5f1::Sox2	26
Atf3	25
NKX3-2	25
PDX1	24
Foxj2	23
JUND	23
REL	23
PAX5	22
NFIA	22
POU5F1B	22
Arnt	22
KLF4	22
E2F3	22
TFAP2A-var.3	22
ETS1	21
ELF3	21
CEBPD	21
JUN	20
EOMES	20
E2F6	20
GATA5	20
TCF7L2	20
CEBPA	19
Tcf7	19
ARNT::HIF1A	19
STAT1	18
HNF4G	18
Vdr	17
BCL6B	17
MAFK	17
KLF5	17
FOS::JUN	16
RUNX2	16
NRF1	16
CREB1	16
CDX2	15
Bcl6	15
Mafb	15
KLF9	15
SP4	14
NFKB2	14
TEAD2	14
ETV6	14
SP3	13
Hand1::Tcf3	13
Stat5a::Stat5b	13
HSF1	12
Foxo1	12
ETV1	12
Gfi1b	11
TP63	11
Klf1	11
SMAD2::SMAD3::SMAD4	11
MYB	11
MYBL2	10
JUNB	10
TP53	10
Atf1	10
GATA1::TAL1	10
MEF2B	10
Nkx3-1	10
FEV	9
FLI1	9
Ahr::Arnt	9
RARA::RXRA	9
NR4A2	8
RXRG	8
NFE2	8
NFATC3	8
SCRT1	8
FOXP1	8
RXRB	8
ZBTB18	7
SPIB	7
Nfe2l2	7
Hic1;	7
ATF4	7
Bach1::Mafk	6
NFYB	6
FOXH1	6
ETV3	6
TBX1	6
ERF	6
EGR4	5
MAFF	5
MEF2A	5
FOXP3	5
HEY1	5
NFATC1	5
ELK4	5
ZNF143	5
NR3C2	5
IRF1	5
POU2F2	4
GLI2	4
NFYA	4
NFIL3	4
MAFG	4
Srebf1(var.2)	4
BATF3	4
SREBF1	4
REST	4
KLF13	4
MAF::NFE2	4
SNAI2	4
PPARG	4
TFDP1	4
NR3C1	3
HNF1B	3
Dux	3
Ddit3::Cebpa	3
PRDM1	3
ELF5	3
EGR3	3
HINFP	3
NR2C2	3
ELK3	3
XBP1	3
Mecom	3
SRF	3
Alx4	2
DUX4	2
RFX5	2
Arntl	2
RORA	2
Ascl2	2
TP73	2
Sox17	2
Rarg	2
RXRA::VDR	2
RORA(var.2)	1
SREBF2	1
SP2	1
Rfx1	1
Pax6	1
E2F8	1
Rarb	1
Gmeb1	1
HOXA13	1
Nr5a2	1