NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_HOXA6_SRX359894	number of peaks	29896
antibody	HOXA6
cell line	LOVO	Number of reads	10052748
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	953
ERG	859
FOS	776
ELF1	769
MYC	744
MYCN	744
FOXA1	722
Gabpa	686
Hnf4a	674
E2F1	666
BATF::JUN	627
NR2F1	613
ELK1	584
JUND	581
ZBTB7A	568
FOSL2	567
E2F4	558
ZNF740	550
Esrrg	542
JUN	536
Foxa2	531
KLF5	519
MAX	519
KLF4	504
Sox2	496
GATA3	492
FOS::JUN	488
EGR1	487
ETS1	477
FOSL1	473
ZEB1	466
SOX9	459
TAL1::TCF3	439
CTCF	424
Atf3	419
Tcf12	419
TCF4	415
NFIC	407
MYBL1	386
TFAP2A	377
TFDP1	372
Gata4	361
GATA5	361
PBX1	356
RUNX1	356
EGR2	345
STAT3	345
TCF3	339
Ar	334
CDX2	334
TFAP2C	326
ELF3	326
ETV1	319
Rxra	317
NFYA	317
NR1H2::RXRA	308
KLF9	307
MAX::MYC	302
ELK4	299
TFAP2A-var.2	291
Gata1	278
NFYB	274
Pparg::Rxra	270
YY1	270
Esrra	269
Klf1	264
SP3	257
TEAD4	256
HEY1	251
GATA2	246
ERF	239
ELK3	229
ETV3	228
ETV6	222
NRF1	221
USF2	220
HNF4G	220
ZNF263	210
E2F6	209
BHLHE40	209
CREB1	207
USF1	200
TCF7L2	196
TEAD1	195
POU5F1B	194
BHLHE41	192
CEBPB	187
FLI1	185
SP2	184
Atf1	183
JUNB	182
Tcf7	178
STAT1::STAT2	175
SPI1	171
FEV	160
NFKB1	159
RUNX3	158
NFIA	151
NFE2	149
RELA	145
Foxj2	142
Arnt	141
Nfe2l2	134
CEBPA	133
OTX2	132
TFAP4	123
REL	121
Tcf21	118
FOXP1	111
TFAP2A-var.3	110
TP63	110
EBF1	106
NFATC3	106
NR4A2	105
NKX3-2	103
MAF::NFE2	103
PAX5	100
MAFG	99
BATF3	98
SP4	96
CEBPD	96
SMAD2::SMAD3::SMAD4	93
MAFK	93
E2F3	90
MAFF	89
GMEB2	87
GATA1::TAL1	87
ARNT::HIF1A	85
Arid3a	85
NEUROD1	83
Gmeb1	82
THAP1	81
Foxo1	78
NFKB2	78
HNF1B	78
Ahr::Arnt	76
Mecom	76
MYBL2	72
NR3C2	72
RUNX2	70
Nkx3-1	69
SPIB	69
Hand1::Tcf3	67
STAT1	66
Mafb	65
Nr1h3::Rxra	65
EGR4	64
ETV4	64
PDX1	64
Bach1::Mafk	61
MEF2B	60
Pou5f1::Sox2	60
XBP1	59
SNAI2	59
PRDM1	54
MYB	50
Arntl	50
CREB3L1	49
Stat5a::Stat5b	48
IRF1	45
TP73	45
HSF1	45
HOXA13	45
BARX1	44
Vdr	44
ATF4	43
HINFP	43
RARA::RXRA	42
EOMES	39
TEAD2	38
EGR3	36
RXRB	33
NFIL3	32
HNF1A	32
RXRG	31
ZNF143	30
NFATC1	30
NR2C2	30
KLF13	30
Hic1;	30
Gfi1b	28
Ddit3::Cebpa	28
BCL6B	27
Dux	27
MEF2A	27
GLI2	27
CREB3	25
Rarg	24
Bcl6	24
SCRT1	23
ZBTB33	23
SRF	23
RFX5	23
TBX1	22
SREBF2	20
Rarb	20
Srebf1(var.2)	19
TP53	19
GRHL1	19
DUX4	18
RORA(var.2)	18
FOXP3	18
Sox17	18
SREBF1	18
ELF5	17
MAFG::NFE2L1	15
FOXH1	13
POU2F2	13
REST	11
MEF2D	11
RORA	10
Arx	10
RXRA::VDR	10
NR3C1	10
Tcfl5	9
FOXO4	9
Rfx1	8
Ascl2	7
LEF1	7
HOXA5	7
FOS::JUND	7
Creb3l2	7
PPARG	7
CLOCK	6
RFX2	5
ZBTB18	5
Klf12	5
Pitx1	5
TFE3	5
FOS::JUNB	5
IRF2	4
Alx4	4
MEIS1	4
Hoxa11	4
NFAT5	3
Hes1	3
MIXL1	3
RARA	3
Nkx2-5-var.2	3
TBX19	3
Pax6	3
MTF1	2
HES5	2
ATF7	2
NKX2-3	2
Id2	2
SMAD3	2
Nr5a2	2
HSF2	2
DBP	2
PROX1	2
FOSB::JUN	1
MEOX2	1
IRF9	1
FOS::JUN(var.2)	1
Stat6	1
POU3F2	1
E2F8	1
NFIC::TLX1	1
ISX	1

Motif name

Number of overlap

953

859

776

769

744