NAIK Genome Database

experiment name	hs_ColonAdenoCarcinoma_LoVo_cancer_HNF1A_ERX159247	number of peaks	16593
antibody	HNF1A	link to motif view if antibody and consensus motif is the same
cell line	LOVO	Number of reads	3750697
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	589
ERG	551
ELF1	495
FOXA1	492
FOS	464
HNF1B	446
Gabpa	438
Hnf4a	409
ELK1	403
BATF::JUN	393
E2F1	389
MYC	380
NR2F1	376
GATA3	368
HNF1A	367
ZBTB7A	356
ZNF740	355
Foxa2	352
FOSL2	351
MYCN	348
JUND	346
E2F4	345
Esrrg	341
KLF5	328
JUN	327
ETS1	313
KLF4	299
Sox2	299
FOSL1	294
FOS::JUN	284
GATA5	281
Atf3	276
CDX2	262
EGR1	260
TAL1::TCF3	255
Tcf12	254
Gata4	250
ETV1	240
STAT3	235
MYBL1	232
PBX1	231
ZEB1	230
TCF4	228
NFIC	227
TFDP1	224
MAX	224
ELK4	223
SOX9	222
EGR2	222
TFAP2A	203
YY1	200
Esrra	192
NR1H2::RXRA	192
RUNX1	190
TCF3	189
TFAP2A-var.2	188
ERF	188
ELF3	185
Rxra	184
TEAD4	179
CTCF	179
Ar	178
CEBPB	176
Gata1	175
TFAP2C	169
ELK3	166
NRF1	166
GATA2	160
SP3	155
Pparg::Rxra	153
TCF7L2	144
ETV3	143
Klf1	138
HEY1	136
ETV6	134
CEBPA	133
Tcf7	133
FEV	127
CREB1	127
MAX::MYC	126
BHLHE40	125
TEAD1	123
JUNB	123
HNF4G	122
Atf1	121
USF2	119
E2F6	113
BHLHE41	112
STAT1::STAT2	112
USF1	106
SP2	105
CEBPD	102
SPI1	100
RELA	100
Arid3a	98
NFIA	97
ZNF263	96
RUNX3	93
KLF9	93
FLI1	92
NFE2	92
NFKB1	89
NFYA	89
Tcf21	88
OTX2	87
NFYB	86
SP4	84
Foxj2	80
TFAP4	79
NR4A2	79
Nfe2l2	78
NKX3-2	78
TP63	76
TFAP2A-var.3	76
Arnt	75
REL	74
MAF::NFE2	73
EBF1	72
MYBL2	72
E2F3	70
NFATC3	68
FOXP1	67
Mecom	67
MAFF	66
MAFG	63
BATF3	59
RUNX2	59
PAX5	59
THAP1	57
GMEB2	57
Foxo1	56
NEUROD1	56
GATA1::TAL1	56
POU5F1B	54
EGR4	53
PDX1	53
Hand1::Tcf3	50
STAT1	49
MAFK	48
NR3C2	47
Bach1::Mafk	47
Gmeb1	46
SMAD2::SMAD3::SMAD4	45
SPIB	45
ETV4	44
NFKB2	42
Mafb	42
XBP1	40
Nr1h3::Rxra	40
MYB	38
Ahr::Arnt	37
ATF4	36
Nkx3-1	36
ARNT::HIF1A	35
NFIL3	35
HSF1	32
CREB3L1	32
Stat5a::Stat5b	31
Pou5f1::Sox2	31
RARA::RXRA	31
Vdr	31
RXRB	31
PRDM1	29
KLF13	29
BARX1	28
ZNF143	28
RXRG	26
HOXA13	25
HINFP	24
Arntl	23
Gfi1b	23
TP73	23
EGR3	22
EOMES	20
Ddit3::Cebpa	20
GRHL1	19
IRF1	19
CREB3	18
Hic1;	18
MEF2B	18
SNAI2	17
Ascl2	17
TEAD2	17
TBX1	17
GLI2	17
NFATC1	17
Bcl6	16
BCL6B	16
POU2F2	16
FOXH1	15
TP53	15
ZBTB33	13
NR2C2	12
Srebf1(var.2)	12
Dux	12
ELF5	11
SREBF1	11
FOXP3	11
MAFG::NFE2L1	11
Sox17	11
SCRT1	11
DUX4	10
RORA(var.2)	10
Arx	10
SREBF2	10
Rarg	9
SRF	8
MEF2A	8
Klf12	8
Pitx1	7
RFX5	7
NR3C1	7
FOXO4	7
Creb3l2	7
REST	6
Rarb	6
FOS::JUND	6
RXRA::VDR	6
CLOCK	6
Id2	5
MEF2D	5
FOS::JUNB	5
Hoxa11	4
PPARG	4
HOXA5	4
Alx4	4
ZBTB18	4
LEF1	4
RFX2	4
Hes1	4
HSF2	3
Rfx1	3
PROX1	3
E2F8	3
TFE3	3
RORA	3
MEIS1	3
HES5	2
NFAT5	2
RARA	2
TBX19	1
NKX2-3	1
Pax6	1
SMAD3	1

Motif name

Number of overlap

589

551

495

492

464