NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_LoVo_cancer_CTCF_SRX359859	number of peaks	30744
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	LOVO	Number of reads	13516420
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	9518
MYC	2445
MYCN	2270
Tcf12	1833
SP1	1626
TCF4	1559
ZEB1	1353
TAL1::TCF3	1299
NFIC	1240
NR2F1	1053
TCF3	1049
ZBTB7A	846
MYBL1	813
Sox2	782
ZNF740	755
RUNX1	741
RUNX3	704
MAX	703
STAT3	679
E2F4	661
E2F1	647
Gabpa	638
ERG	630
TFAP2A-var.2	628
TFAP2A	626
TFAP2C	592
EGR1	584
ELF1	583
Esrrg	571
MAX::MYC	516
FOXA1	481
YY1	467
TEAD4	418
TFAP4	416
NR1H2::RXRA	394
EGR2	390
Rxra	377
Pparg::Rxra	376
BHLHE41	373
ZNF263	368
ELK1	362
NEUROD1	346
Foxa2	335
Gata1	325
KLF4	321
GATA3	318
NFKB1	311
TFAP2A-var.3	305
E2F6	291
Ar	289
USF2	274
EBF1	271
Nr1h3::Rxra	266
Hnf4a	264
Arid3a	259
USF1	249
OTX2	244
ETS1	242
NRF1	239
FOS	234
THAP1	234
STAT1::STAT2	231
TEAD1	225
CEBPB	224
Gata4	222
BHLHE40	222
Tcf21	219
PBX1	211
Esrra	211
GATA2	194
PAX5	190
KLF5	190
SPI1	184
SOX9	183
KLF9	179
REL	174
NFIA	170
ELF3	169
FOSL2	167
POU5F1B	166
TCF7L2	165
E2F3	165
BATF::JUN	164
FLI1	161
NKX3-2	160
RELA	157
Foxj2	153
SMAD2::SMAD3::SMAD4	152
GATA5	151
Tcf7	149
CEBPD	144
ETV1	143
Atf3	139
FOSL1	138
NFKB2	136
Klf1	133
CEBPA	133
SP3	130
JUND	130
Arnt	125
Hand1::Tcf3	124
PDX1	123
JUN	114
SP4	113
Mafb	110
Pou5f1::Sox2	108
MAFK	105
ARNT::HIF1A	103
FOS::JUN	102
HNF4G	101
CREB1	98
TEAD2	97
TFDP1	97
HSF1	97
ETV6	97
HEY1	96
RUNX2	93
RARA::RXRA	93
ELK4	92
EOMES	91
STAT1	89
Atf1	89
TP63	86
BCL6B	84
Foxo1	84
Stat5a::Stat5b	81
ETV3	79
Vdr	74
KLF13	73
MYB	69
CDX2	67
Bcl6	64
MYBL2	64
ELK3	64
SNAI2	62
FOXP1	62
MEF2B	58
Gfi1b	58
GATA1::TAL1	58
NFATC3	57
ERF	54
MAFF	53
NFE2	51
Ahr::Arnt	51
SCRT1	51
Bach1::Mafk	50
EGR4	49
NR3C2	49
ZNF143	48
MEF2A	48
Nfe2l2	46
SRF	45
TP53	45
FEV	45
MAFG	45
MAF::NFE2	44
ZBTB18	44
IRF1	42
PRDM1	42
NFYA	41
Hic1;	40
SP2	39
POU2F2	38
NR4A2	37
REST	37
NFYB	37
NFIL3	37
HINFP	36
Nkx3-1	36
JUNB	35
TBX1	35
BATF3	35
SPIB	35
ATF4	27
RXRG	27
FOXH1	26
RXRB	26
Ddit3::Cebpa	25
PPARG	24
EGR3	23
NR3C1	21
NFATC1	20
FOXP3	20
Dux	18
ELF5	17
DUX4	17
XBP1	16
GLI2	16
HNF1B	16
GRHL1	16
TP73	16
Arntl	15
Gmeb1	15
SREBF1	14
RFX5	13
SREBF2	13
Ascl2	13
CREB3L1	13
NR2C2	12
Mecom	12
Srebf1(var.2)	11
Rarg	11
Sox17	11
MEF2D	9
ZBTB33	9
RXRA::VDR	9
Rarb	8
MEIS1	7
PROX1	7
ETV4	6
LEF1	5
GMEB2	5
Nr5a2	5
RORA(var.2)	4
MAFG::NFE2L1	4
Creb3l2	3
RFX2	3
TBX19	3
SMAD3	2
Tcfl5	2
ISX	2
E2F8	2
Alx4	2
Pax6	2
RARA	2
BARX1	2
E2F2	1
FOS::JUND	1
ISL2	1
NFIC::TLX1	1
HSF2	1
CREB3	1
HNF1A	1
HOXA5	1
Hes1	1
Klf12	1
RORA	1
IRF2	1
MIXL1	1
TFE3	1
Arx	1
CLOCK	1
NKX2-3	1
Hoxa9	1
Pitx1	1
DBP	1

Motif name

Number of overlap

9518

2445

2270

1833

1626