experiment name
hs_ColonAdenocarcinoma_GP5d_cancer_RAD21_SRX360578
number of peaks
53134
antibody
RAD21
cell line
GP5D
Number of reads
18490952
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
CTCF
14537
MYC
3605
MYCN
3115
Tcf12
2449
TCF4
2047
SP1
1913
NFIC
1736
ZEB1
1684
TAL1::TCF3
1646
NR2F1
1524
TCF3
1335
Sox2
1305
FOXA1
1144
RUNX1
1115
MYBL1
1109
MAX
1076
Gabpa
984
RUNX3
983
STAT3
970
ERG
965
ELF1
895
ZBTB7A
887
Esrrg
866
TFAP2C
840
Foxa2
834
TFAP2A
804
MAX::MYC
764
TEAD4
746
YY1
745
FOS
732
ZNF740
720
E2F4
684
GATA3
684
TFAP2A-var.2
602
NR1H2::RXRA
600
BHLHE41
590
Gata1
588
EGR1
575
Rxra
569
Pparg::Rxra
560
Ar
557
FOSL2
554
TFAP4
552
Hnf4a
545
KLF4
539
BATF::JUN
530
Gata4
510
JUND
508
CEBPB
507
ZNF263
486
E2F1
476
FOSL1
464
NEUROD1
457
PBX1
453
Arid3a
448
Atf3
427
JUN
426
NFKB1
424
OTX2
420
USF2
411
USF1
407
ELK1
405
TEAD1
402
Esrra
392
GATA2
390
GATA5
382
FOS::JUN
382
EGR2
371
EBF1
368
Nr1h3::Rxra
361
ELF3
345
KLF5
335
TCF7L2
316
ETS1
313
SOX9
312
SPI1
303
NFIA
289
CDX2
287
Tcf7
286
STAT1::STAT2
286
Foxj2
277
Tcf21
273
E2F6
272
BHLHE40
271
CEBPA
268
TFAP2A-var.3
264
CEBPD
261
NKX3-2
256
THAP1
251
POU5F1B
246
PAX5
245
RELA
243
FLI1
230
REL
228
NRF1
220
TP63
202
MAFK
196
SMAD2::SMAD3::SMAD4
196
KLF9
193
PDX1
193
Arnt
190
Pou5f1::Sox2
187
Mafb
179
HNF4G
178
EOMES
166
ETV1
163
ARNT::HIF1A
162
Hand1::Tcf3
161
Klf1
160
NFKB2
159
CREB1
158
NFE2
153
E2F3
149
FOXP1
143
Foxo1
143
JUNB
139
MAFF
137
HSF1
137
HEY1
136
MYBL2
135
GATA1::TAL1
135
RUNX2
133
SP3
132
Nfe2l2
132
TEAD2
129
MAF::NFE2
128
ETV6
124
STAT1
120
Bach1::Mafk
119
TFDP1
119
Atf1
117
ETV3
115
Vdr
115
RARA::RXRA
115
BCL6B
114
ELK4
112
SP4
107
MAFG
104
MEF2B
100
Bcl6
96
ERF
95
Ahr::Arnt
94
TP53
92
NR3C2
90
FEV
89
Nkx3-1
88
Gfi1b
85
NR4A2
84
PRDM1
83
Stat5a::Stat5b
82
SCRT1
81
MYB
77
REST
76
ZNF143
75
ELK3
74
MEF2A
74
SRF
71
ATF4
70
NFIL3
68
NFATC3
67
SNAI2
64
BATF3
62
Hic1;
60
SPIB
57
ZBTB18
49
POU2F2
49
EGR4
49
KLF13
48
IRF1
47
NFYB
47
Ddit3::Cebpa
46
HINFP
43
NFYA
43
HNF1B
43
FOXH1
41
RXRB
40
RXRG
40
Mecom
39
PPARG
39
Gmeb1
38
GRHL1
38
TBX1
38
TP73
38
FOXP3
37
Dux
37
RFX5
32
ETV4
29
DUX4
29
Srebf1(var.2)
27
Arntl
26
NFATC1
25
XBP1
25
EGR3
24
Sox17
24
GLI2
23
NR3C1
23
CREB3L1
23
MAFG::NFE2L1
22
RXRA::VDR
20
NR2C2
20
Rarb
20
SREBF2
19
ELF5
18
SREBF1
16
SP2
16
MEIS1
15
GMEB2
15
MEF2D
14
HNF1A
12
Ascl2
11
Rarg
11
BARX1
10
TBX19
10
HOXA13
10
PROX1
9
RARA
9
RORA(var.2)
9
Pax6
8
LEF1
8
Nr5a2
8
Creb3l2
6
ZBTB33
6
CREB3
6
Hoxa9
5
SMAD3
4
RORA
4
NKX2-3
4
TFE3
4
FOS::JUND
3
FOXO4
3
HSF2
3
Id2
3
MIXL1
3
Klf12
2
FOS::JUNB
2
CLOCK
2
Hes1
2
Rfx1
2
Nkx2-5-var.2
2
Pitx1
2
NFIC::TLX1
2
Alx4
1
IRF2
1
Sox1
1
Arx
1
NKX2-8
1
Tcfl5
1
HOXA5
1
DBP
1
E2F8
1
RFX2
1