NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_GP5d_cancer_HNF4A_SRX360584	number of peaks	8612
antibody	HNF4A	link to motif view if antibody and consensus motif is the same
cell line	GP5D	Number of reads	6429876
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
Hnf4a	1076
HNF4G	389
NR2F1	317
Rxra	291
NR1H2::RXRA	274
Pparg::Rxra	210
SP1	196
FOXA1	181
MYC	180
MYCN	176
FOS	172
TFAP2A	151
FOSL2	148
KLF5	141
BATF::JUN	141
ZNF740	139
ERG	137
JUND	135
GATA3	133
TFAP2C	129
Sox2	125
Esrra	125
ELF1	125
Tcf12	123
Foxa2	122
Esrrg	118
EGR1	116
TCF4	113
GATA5	113
Atf3	113
JUN	113
ZBTB7A	113
TAL1::TCF3	110
MAX	107
FOS::JUN	107
FOSL1	106
Gabpa	105
ZEB1	105
Gata4	100
TFAP2A-var.2	96
KLF4	95
E2F1	94
TCF7L2	94
CDX2	93
TCF3	90
TEAD4	89
Tcf7	86
EGR2	85
NFIC	80
SOX9	78
RUNX1	77
PBX1	72
CTCF	72
Ar	71
HEY1	63
Gata1	63
BHLHE41	61
E2F4	61
MAX::MYC	60
TEAD1	58
STAT3	58
MYBL1	57
ELF3	57
YY1	53
GATA2	53
ZNF263	51
TFDP1	51
USF2	50
E2F6	49
CEBPB	48
FEV	46
ELK1	45
USF1	44
BHLHE40	44
KLF9	44
SPI1	44
NFIA	43
Klf1	42
CEBPA	42
OTX2	40
RXRB	39
JUNB	37
NFKB1	37
ETV1	37
NR2C2	37
EBF1	37
ETS1	36
Tcf21	36
NFE2	35
RXRG	35
TP63	35
MAFF	34
TFAP4	34
NRF1	34
MYBL2	34
FLI1	32
RUNX3	32
Nfe2l2	32
SP3	32
Arid3a	31
TFAP2A-var.3	29
CEBPD	29
STAT1::STAT2	29
MAFK	26
MAFG	26
RELA	26
MAF::NFE2	26
ELK4	25
ERF	25
CREB1	25
POU5F1B	24
NR4A2	24
RARA::RXRA	24
Vdr	24
Ahr::Arnt	24
GATA1::TAL1	22
Bach1::Mafk	22
Hand1::Tcf3	21
NKX3-2	21
Nr1h3::Rxra	21
ETV6	21
ETV3	21
NR3C2	20
HSF1	18
REL	18
PAX5	18
Foxj2	18
Atf1	18
ELK3	18
SMAD2::SMAD3::SMAD4	17
ZNF143	17
E2F3	17
Arnt	16
Mafb	16
NFIL3	15
HNF1B	15
EGR4	15
PDX1	15
THAP1	15
NEUROD1	15
TP73	14
NFKB2	14
RUNX2	14
SPIB	13
ARNT::HIF1A	13
FOXP1	13
GRHL1	13
SP4	12
Nkx3-1	12
CREB3L1	12
PRDM1	11
Srebf1(var.2)	11
EOMES	11
Foxo1	11
NFYA	11
SNAI2	11
IRF1	10
Arntl	10
Gmeb1	10
Mecom	10
GMEB2	10
Hic1;	9
BATF3	9
Gfi1b	9
Pou5f1::Sox2	9
STAT1	9
MAFG::NFE2L1	8
ETV4	8
HNF1A	8
NFYB	7
SP2	7
NFATC3	7
MYB	7
Sox17	7
TEAD2	7
HINFP	7
MEF2B	7
REST	7
EGR3	7
Stat5a::Stat5b	6
XBP1	6
GLI2	6
Ddit3::Cebpa	6
CREB3	6
BARX1	6
RORA(var.2)	6
SCRT1	5
ZBTB33	5
SREBF1	5
DUX4	4
BCL6B	4
Dux	4
LEF1	4
MEF2A	3
Ascl2	3
SREBF2	3
FOXO4	3
PPARG	3
NR3C1	3
Bcl6	3
FOXH1	3
SRF	3
KLF13	3
FOS::JUND	2
RXRA::VDR	2
ZBTB18	2
NFATC1	2
Arx	2
Rarb	2
ATF4	2
TBX19	2
TBX1	2
HOXA5	2
HOXA13	2
HSF2	2
Rarg	2
Creb3l2	2
FOXP3	2
Id2	2
POU2F2	1
Hes2	1
RORA	1
MEIS1	1
ISX	1
MIXL1	1
NFAT5	1
TFEB	1
Klf12	1
MEF2D	1
ELF5	1
FOS::JUNB	1
CLOCK	1
TP53	1
Alx4	1