NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_GP5d_cancer_HNF4A_SRX360570	number of peaks	20299
antibody	HNF4A	link to motif view if antibody and consensus motif is the same
cell line	GP5D	Number of reads	10080319
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Hnf4a	2693
HNF4G	857
NR2F1	778
FOXA1	701
Rxra	685
NR1H2::RXRA	631
FOS	559
Foxa2	554
Pparg::Rxra	501
GATA3	466
MYC	444
BATF::JUN	440
ERG	429
FOSL2	429
JUND	418
Sox2	413
SP1	404
ELF1	390
TFAP2A	390
GATA5	389
MYCN	387
CDX2	379
Gata4	374
TFAP2C	362
JUN	361
Tcf12	354
Gabpa	353
FOSL1	348
FOS::JUN	337
Esrra	335
TCF4	320
Atf3	318
Esrrg	309
TCF7L2	294
TAL1::TCF3	290
ZEB1	284
KLF5	279
Tcf7	273
MAX	272
Ar	270
KLF4	257
NFIC	255
Gata1	253
ZBTB7A	243
RUNX1	240
TCF3	238
GATA2	237
TEAD4	223
PBX1	217
TFAP2A-var.2	217
ZNF740	206
BHLHE41	205
ELF3	200
CEBPB	195
CTCF	195
SOX9	192
STAT3	166
EGR1	162
MAX::MYC	160
CEBPA	155
MYBL1	143
E2F1	137
EGR2	131
SPI1	130
USF1	130
TEAD1	124
USF2	120
E2F4	119
JUNB	118
MYBL2	116
ELK1	114
ETS1	111
HEY1	110
OTX2	109
NFIA	106
CEBPD	106
NFE2	104
ZNF263	103
Nfe2l2	100
YY1	99
NFKB1	98
TP63	98
STAT1::STAT2	93
EBF1	85
FLI1	84
TFAP4	83
RUNX3	83
Foxj2	83
Klf1	82
FOXP1	82
ERF	81
MAFF	81
GATA1::TAL1	77
KLF9	77
MAFK	75
E2F6	74
Tcf21	74
BHLHE40	73
RXRG	71
TFDP1	71
RXRB	70
MAF::NFE2	69
MAFG	69
RELA	68
CREB1	67
NR2C2	67
REL	66
Nr1h3::Rxra	65
Arid3a	65
Vdr	64
ETV1	63
ETV6	62
NKX3-2	62
Mecom	61
Foxo1	60
Nkx3-1	60
TFAP2A-var.3	59
Mafb	56
POU5F1B	55
ELK4	55
PDX1	55
FEV	53
NR3C2	53
Bach1::Mafk	52
NR4A2	52
Arnt	52
NFKB2	51
SP3	51
SPIB	50
RUNX2	49
RARA::RXRA	49
NRF1	49
HNF1B	45
ETV3	41
NEUROD1	40
NFIL3	39
HSF1	38
TP73	35
ELK3	33
Pou5f1::Sox2	33
ETV4	32
Ahr::Arnt	32
MEF2B	32
PAX5	32
ARNT::HIF1A	31
SMAD2::SMAD3::SMAD4	31
Atf1	31
Hand1::Tcf3	31
THAP1	30
EOMES	29
ZNF143	27
MYB	26
NFYA	26
GRHL1	25
STAT1	25
BATF3	23
PRDM1	22
Gmeb1	22
NFYB	22
IRF1	22
HNF1A	22
EGR4	21
NFATC3	21
Sox17	20
Ddit3::Cebpa	20
E2F3	20
SRF	20
CREB3L1	20
Gfi1b	18
TP53	18
ATF4	18
Dux	16
BARX1	16
TEAD2	16
Hic1;	16
SCRT1	15
BCL6B	15
Stat5a::Stat5b	15
RXRA::VDR	15
XBP1	14
Srebf1(var.2)	14
NFATC1	13
SP4	13
NR3C1	12
FOXP3	11
MAFG::NFE2L1	11
REST	11
LEF1	11
SP2	10
HOXA13	10
Arntl	10
Ascl2	10
DUX4	10
Bcl6	10
TBX1	9
EGR3	9
Rarg	9
SNAI2	8
MEF2A	8
CREB3	8
GLI2	8
POU2F2	8
PPARG	7
FOXO4	7
FOXH1	7
ELF5	7
NFAT5	6
GMEB2	6
Arx	6
MEF2D	5
Rarb	5
Pitx1	5
RORA	5
SREBF1	5
KLF13	5
RORA(var.2)	5
ZBTB18	5
FOS::JUND	4
RARA	4
MEIS1	4
ISX	3
Pax6	3
FOS::JUNB	3
TBX19	2
MIXL1	2
Hes1	2
HSF2	2
Nr5a2	2
DBP	2
SMAD3	2
Creb3l2	1
HINFP	1
SREBF2	1
LMX1B	1
Tcfl5	1
Alx4	1
Id2	1
ZBTB33	1
E2F8	1
Rfx1	1
NKX2-3	1
HES5	1
TFE3	1
Nkx2-5-var.2	1
Hoxa11	1
E2F2	1
CLOCK	1
Klf12	1

Motif name

Number of overlap

2693

857

778

701

685