NAIK Genome Database

experiment name	hs_ColonAdenocarcinoma_GP5d_cancer_CTCF_SRX360582	number of peaks	32655
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	GP5D	Number of reads	4518948
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	7612
MYC	1961
MYCN	1781
Tcf12	1464
TCF4	1254
SP1	1168
ZEB1	1044
TAL1::TCF3	986
NFIC	947
NR2F1	807
TCF3	773
ZBTB7A	591
Sox2	569
MYBL1	565
RUNX1	558
RUNX3	545
ZNF740	519
MAX	497
STAT3	472
Gabpa	469
TFAP2C	448
ELF1	418
TFAP2A	415
ERG	414
E2F4	405
MAX::MYC	380
Esrrg	369
TFAP2A-var.2	367
YY1	366
FOXA1	348
EGR1	337
TEAD4	329
TFAP4	322
E2F1	309
ZNF263	300
NR1H2::RXRA	298
BHLHE41	287
Rxra	278
Pparg::Rxra	268
NEUROD1	262
ELK1	253
Foxa2	245
Gata1	245
EGR2	244
GATA3	240
KLF4	228
NFKB1	223
FOS	213
OTX2	205
EBF1	203
USF2	199
Ar	192
Nr1h3::Rxra	191
TFAP2A-var.3	191
TEAD1	187
Esrra	186
THAP1	184
PBX1	184
Hnf4a	183
E2F6	181
ETS1	179
USF1	173
Arid3a	169
Gata4	167
CEBPB	163
FOSL2	155
PAX5	154
GATA2	153
STAT1::STAT2	150
Tcf21	149
NRF1	140
SPI1	139
BATF::JUN	137
BHLHE40	136
NFIA	135
POU5F1B	132
FOSL1	129
KLF5	128
ELF3	128
SOX9	124
REL	123
JUND	121
GATA5	119
Atf3	117
E2F3	116
SMAD2::SMAD3::SMAD4	110
ETV1	109
FLI1	107
Foxj2	107
CEBPD	105
RELA	104
TCF7L2	104
Arnt	103
KLF9	102
JUN	98
NKX3-2	95
CEBPA	92
PDX1	92
CREB1	91
Tcf7	89
NFKB2	88
Pou5f1::Sox2	85
ARNT::HIF1A	84
FOS::JUN	84
Hand1::Tcf3	83
MAFK	83
EOMES	77
TEAD2	75
Klf1	73
SP3	72
ELK4	72
ETV6	70
TP63	70
HNF4G	70
RUNX2	69
RARA::RXRA	68
ETV3	67
TFDP1	66
Mafb	66
Foxo1	64
HEY1	62
HSF1	62
STAT1	61
ELK3	60
Bach1::Mafk	59
SP4	59
BCL6B	58
FOXP1	57
MYB	56
CDX2	56
NFE2	56
Atf1	56
MAFF	54
MYBL2	51
Vdr	49
Nfe2l2	48
GATA1::TAL1	47
MAF::NFE2	45
MAFG	45
Bcl6	44
ZNF143	43
SCRT1	42
FEV	42
Gfi1b	41
Stat5a::Stat5b	40
Ahr::Arnt	40
NFATC3	39
MEF2B	39
ERF	37
KLF13	37
SNAI2	36
SPIB	34
BATF3	33
IRF1	33
NR3C2	33
REST	32
PRDM1	31
TP53	31
Hic1;	31
NR4A2	31
Nkx3-1	29
EGR4	29
ZBTB18	28
NFIL3	28
MEF2A	27
SRF	27
TBX1	27
POU2F2	25
NFYA	24
NFYB	23
JUNB	22
ATF4	22
RXRB	21
Ddit3::Cebpa	19
XBP1	19
RXRG	19
PPARG	19
FOXH1	18
SP2	18
HINFP	17
FOXP3	17
Dux	16
GLI2	14
RFX5	14
HNF1B	14
DUX4	13
Srebf1(var.2)	13
EGR3	13
SREBF2	13
ELF5	12
SREBF1	11
NFATC1	11
Mecom	10
Arntl	10
Gmeb1	9
Rarb	9
RXRA::VDR	9
NR2C2	8
CREB3L1	8
TP73	8
Rarg	8
NR3C1	8
Sox17	7
MEIS1	7
Ascl2	7
RORA(var.2)	6
ETV4	6
TBX19	5
GRHL1	4
ZBTB33	4
GMEB2	4
PROX1	4
MAFG::NFE2L1	4
Pax6	4
RARA	4
MEF2D	3
LEF1	3
Nr5a2	3
Creb3l2	3
RORA	3
CREB3	3
CLOCK	2
BARX1	2
SMAD3	2
MIXL1	2
HOXA13	2
Id2	1
IRF2	1
Alx4	1
Nkx2-5-var.2	1
FOS::JUND	1
FOXO4	1
E2F2	1
NFIC::TLX1	1
IRF9	1
RFX2	1
NKX2-3	1

Motif name

Number of overlap

7612

1961

1781

1464

1254