NAIK Genome Database

experiment name	hs_CHRF28811_CHRF28811_undef_CTCF_ERX626838	number of peaks	18132
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	CHRF28811	Number of reads	8208382
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
CTCF	7075
MYC	1709
MYCN	1594
Tcf12	1306
SP1	1153
TCF4	1105
ZEB1	960
NFIC	934
TAL1::TCF3	915
TCF3	715
NR2F1	711
MYBL1	569
ZBTB7A	544
E2F4	525
RUNX3	509
STAT3	498
RUNX1	486
Sox2	447
ZNF740	434
MAX	417
TFAP2A-var.2	415
TFAP2A	394
E2F1	392
TFAP2C	390
Gabpa	385
ELF1	356
ERG	349
EGR1	324
Esrrg	322
MAX::MYC	317
YY1	310
EGR2	288
FOXA1	288
TFAP4	281
NR1H2::RXRA	281
ELK1	279
Pparg::Rxra	248
NEUROD1	248
Rxra	238
TEAD4	229
ZNF263	225
Nr1h3::Rxra	224
NFKB1	219
BHLHE41	213
Foxa2	209
TFAP2A-var.3	208
Gata1	204
THAP1	201
NRF1	185
Arid3a	182
USF2	181
GATA3	180
EBF1	180
Ar	175
KLF4	175
OTX2	168
USF1	162
E2F6	156
E2F3	152
ETS1	147
CEBPB	147
BHLHE40	145
STAT1::STAT2	144
PAX5	143
TEAD1	142
KLF5	135
SOX9	135
REL	135
Tcf21	132
NFIA	131
Hnf4a	128
PBX1	126
Esrra	125
FOS	113
SPI1	112
RELA	112
Gata4	111
GATA2	111
SMAD2::SMAD3::SMAD4	103
Foxj2	102
NFKB2	100
NKX3-2	97
POU5F1B	95
ETV1	94
CEBPD	89
FOSL2	88
SP4	87
ELF3	86
BATF::JUN	85
Klf1	83
FLI1	82
Atf3	82
Arnt	81
ELK4	81
TCF7L2	81
KLF9	80
SP3	80
GATA5	78
PDX1	77
EOMES	76
Pou5f1::Sox2	73
Hand1::Tcf3	71
Tcf7	71
STAT1	70
Foxo1	68
CREB1	68
JUND	68
CEBPA	67
FOSL1	67
Mafb	66
RARA::RXRA	66
RUNX2	65
ARNT::HIF1A	62
MAFK	62
JUN	59
TEAD2	59
HNF4G	57
Atf1	57
ETV6	57
HEY1	57
CDX2	55
ETV3	54
HSF1	52
BCL6B	52
KLF13	52
ELK3	51
FOS::JUN	51
TP63	51
MYB	49
TFDP1	48
MYBL2	47
Bcl6	46
GATA1::TAL1	45
Vdr	41
Stat5a::Stat5b	40
ZBTB18	39
ERF	39
TP53	38
SP2	37
NFE2	37
NFATC3	36
MAF::NFE2	35
Gfi1b	34
FOXP1	34
SRF	33
MEF2B	33
Nfe2l2	33
SCRT1	33
FEV	32
MEF2A	30
BATF3	30
Nkx3-1	29
MAFF	29
EGR4	29
Hic1;	28
Ahr::Arnt	28
ZNF143	28
NFYB	28
ATF4	27
NFYA	26
NR4A2	26
PRDM1	26
Bach1::Mafk	24
NFIL3	24
MAFG	23
HINFP	23
POU2F2	22
SNAI2	22
REST	21
IRF1	21
TBX1	20
NR3C2	19
FOXH1	18
JUNB	18
SREBF2	17
PPARG	17
EGR3	17
RXRB	17
Ddit3::Cebpa	15
RXRG	14
XBP1	14
FOXP3	14
Arntl	14
SPIB	14
Ascl2	13
NR3C1	13
Rarg	12
NR2C2	12
RFX5	12
NFATC1	12
GLI2	10
GRHL1	10
SREBF1	9
Dux	9
DUX4	8
Sox17	8
ELF5	8
Rarb	7
HNF1B	6
Mecom	5
RXRA::VDR	5
TP73	5
PROX1	5
Gmeb1	5
Srebf1(var.2)	4
ZBTB33	4
CREB3L1	4
Hes1	4
MEF2D	4
LEF1	4
MEIS1	4
TBX19	4
RARA	4
Nr5a2	4
Pax6	3
ETV4	3
GMEB2	2
MIXL1	2
E2F8	2
RORA	2
CREB3	2
RORA(var.2)	1
Hoxa9	1
Rfx1	1
Pitx1	1
Creb3l2	1
SMAD3	1
CLOCK	1
HNF1A	1
E2F2	1