experiment name
hs_cholangiocarcinoma_HuCCT1_cancer_SMC1_SRX1013334
number of peaks
131742
antibody
SMC1
cell line
HUCCT1
Number of reads
44424972
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
CTCF
29759
FOS
18720
FOSL2
13120
JUND
13011
BATF::JUN
11820
FOSL1
11351
MYC
11092
JUN
9925
MYCN
9754
FOS::JUN
9681
SP1
9361
Atf3
8162
Tcf12
8067
TCF4
6608
NFIC
6524
NR2F1
6482
PBX1
6380
TAL1::TCF3
6347
ERG
6332
ELF1
5777
Gabpa
5708
ZNF740
5318
RUNX1
5292
CEBPB
5132
TCF3
5129
MAX
5065
Esrrg
4958
FOXA1
4920
TEAD4
4490
ZEB1
4386
EGR1
4221
TFAP2C
4191
STAT3
4170
E2F1
4141
TFAP2A
3885
Sox2
3833
ZBTB7A
3781
Foxa2
3707
E2F4
3609
TEAD1
3484
Gata4
3232
CEBPA
3180
MAX::MYC
3174
GATA3
3160
RUNX3
3058
KLF4
3016
MYBL1
2975
Gata1
2951
TFAP2A-var.2
2928
EGR2
2865
JUNB
2825
ELK1
2816
NFE2
2756
Esrra
2682
ETS1
2680
KLF5
2651
NFKB1
2574
Nfe2l2
2570
ELF3
2534
GATA2
2484
BHLHE41
2432
GATA5
2348
USF1
2249
Ar
2243
YY1
2219
CEBPD
2197
USF2
2125
NR1H2::RXRA
2115
FLI1
2035
Tcf21
2034
TFAP4
1988
MAF::NFE2
1984
Pparg::Rxra
1855
Rxra
1835
MAFF
1826
Hnf4a
1764
SPI1
1706
ZNF263
1705
MAFK
1647
REL
1629
NRF1
1589
ETV1
1560
BHLHE40
1556
MAFG
1513
NFIA
1456
TP63
1447
Bach1::Mafk
1374
RELA
1365
E2F6
1364
EBF1
1351
NEUROD1
1316
CREB1
1303
NFKB2
1297
RUNX2
1283
TCF7L2
1256
Klf1
1240
TFAP2A-var.3
1234
ETV6
1202
OTX2
1202
STAT1::STAT2
1130
ELK4
1116
SOX9
1109
Tcf7
1099
PAX5
1078
ERF
1023
SMAD2::SMAD3::SMAD4
987
Nr1h3::Rxra
979
Mafb
934
Arnt
897
KLF9
893
HEY1
884
Foxj2
875
GATA1::TAL1
837
ELK3
836
SP3
827
ETV3
816
Atf1
781
Foxo1
766
THAP1
744
ARNT::HIF1A
725
Hand1::Tcf3
714
TFDP1
714
POU5F1B
701
NKX3-2
674
E2F3
670
ATF4
664
BATF3
632
SP4
626
HNF4G
617
NR3C2
614
Arid3a
593
Pou5f1::Sox2
589
RARA::RXRA
585
HSF1
547
PDX1
544
MYBL2
541
Ddit3::Cebpa
533
FOXP1
532
NFIL3
510
CDX2
507
EOMES
507
EGR4
481
REST
431
STAT1
407
MYB
403
SP2
399
Ahr::Arnt
395
TEAD2
382
MEF2B
366
PRDM1
353
Stat5a::Stat5b
338
SNAI2
334
MAFG::NFE2L1
328
TP53
324
NFATC3
318
ZNF143
295
BCL6B
284
MEF2A
264
NFYB
258
Vdr
255
RXRB
253
HNF1B
250
XBP1
249
EGR3
247
Nkx3-1
245
RXRG
243
ETV4
239
TP73
238
Bcl6
238
FEV
233
IRF1
232
GRHL1
226
SCRT1
225
TBX1
218
Gfi1b
204
KLF13
202
NFYA
196
SRF
187
NFATC1
184
Dux
182
Sox17
179
NR4A2
179
Arntl
172
Hic1;
166
POU2F2
160
HINFP
159
FOXP3
156
FOXH1
152
ZBTB18
139
GMEB2
126
NR3C1
121
DUX4
119
ELF5
115
RFX5
111
SPIB
104
Mecom
101
Gmeb1
89
NR2C2
87
ZBTB33
85
PPARG
81
SREBF2
78
SREBF1
77
MEIS1
77
HNF1A
66
RXRA::VDR
62
CLOCK
62
TBX19
57
MEF2D
56
CREB3L1
55
Rarg
54
Rarb
54
LEF1
46
FOS::JUNB
41
Ascl2
40
FOS::JUND
39
GLI2
36
Nr5a2
35
RARA
32
Pax6
29
Srebf1(var.2)
25
PROX1
23
CREB3
23
SMAD3
22
BARX1
20
RORA(var.2)
19
Creb3l2
13
NFIC::TLX1
12
Hes1
12
Rfx1
11
FOXO4
9
Hoxa9
9
RFX2
9
RORA
9
FOS::JUN(var.2)
7
HOXA13
7
Stat4
7
HSF2
7
Sox1
6
FOSB::JUN
6
MIXL1
5
Id2
5
TFE3
5
IRF2
4
POU3F2
4
DBP
3
IRF9
3
HOXA5
3
Pitx1
3
NFAT5
3
E2F8
3
Klf12
2
Hoxa11
2
E2F2
2
TFEB
2
PAX3
2
Arx
2
ESR1
2
Alx4
1
NKX2-3
1
TBP
1
Myod1
1
HES5
1
ATF7
1
SOX4
1
Znf423
1
NKX2-8
1