NAIK Genome Database

experiment name	hs_cholangiocarcinoma_HuCCT1_cancer_CDK9_SRX1013342	number of peaks	10551
antibody	CDK9
cell line	HUCCT1	Number of reads	28472348
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
SP1	541
E2F1	492
MYC	456
MYCN	455
ZNF740	362
EGR1	348
ERG	341
E2F4	331
ZBTB7A	315
ELK1	291
TAL1::TCF3	271
Gabpa	271
MAX	270
ELF1	267
EGR2	265
CTCF	255
ETS1	251
TCF4	247
NR2F1	234
Tcf12	228
Esrrg	209
TFAP2A-var.2	207
TCF3	205
TFAP2A	205
NRF1	198
ZEB1	196
TFAP2C	186
MAX::MYC	185
ETV1	169
E2F6	163
KLF5	158
RUNX1	158
YY1	153
Sox2	146
TFDP1	144
FOS	144
NFIC	142
KLF4	140
ELK4	139
STAT3	137
MYBL1	136
ERF	133
ZNF263	129
Ar	126
HEY1	114
ELK3	114
BHLHE41	113
ETV3	107
ETV6	103
BHLHE40	101
FLI1	101
USF1	99
USF2	99
SP3	98
KLF9	97
JUND	93
BATF::JUN	93
FOSL2	91
Esrra	89
SPI1	89
TEAD4	85
STAT1::STAT2	84
Klf1	83
JUN	81
NFKB1	80
NFATC3	79
FOXA1	78
FOSL1	78
SOX9	77
TFAP2A-var.3	77
FOS::JUN	75
THAP1	75
RUNX3	72
Gata1	72
ELF3	68
EBF1	67
Arnt	67
E2F3	66
TEAD1	63
Atf3	63
REL	62
Pparg::Rxra	62
CEBPB	61
Hnf4a	61
Tcf21	59
PBX1	59
NEUROD1	59
Rxra	57
NR1H2::RXRA	55
CREB1	54
SP2	53
POU5F1B	52
Atf1	51
ARNT::HIF1A	51
GATA2	51
SMAD2::SMAD3::SMAD4	50
Foxa2	50
EGR4	49
RELA	46
GATA3	45
Gata4	45
SP4	44
Hand1::Tcf3	44
NFKB2	43
PAX5	43
NFIA	41
GATA5	40
FEV	40
TFAP4	40
OTX2	40
NR4A2	39
CEBPA	39
NFE2	37
HINFP	37
CEBPD	36
Ahr::Arnt	36
NR3C2	35
TP63	33
SNAI2	33
NFYB	32
Nfe2l2	31
RUNX2	30
XBP1	30
NFYA	28
RARA::RXRA	28
MAF::NFE2	26
MYB	26
TCF7L2	26
EGR3	25
MAFK	25
Bach1::Mafk	24
GMEB2	23
ETV4	23
GATA1::TAL1	23
Foxj2	23
BATF3	22
HNF4G	22
KLF13	21
Tcf7	20
JUNB	20
Stat5a::Stat5b	20
SCRT1	19
Nr1h3::Rxra	18
HSF1	18
MAFF	18
Mafb	18
MAFG	17
Pou5f1::Sox2	17
STAT1	17
ELF5	16
NKX3-2	16
Arntl	16
CREB3L1	15
Gfi1b	14
PRDM1	14
Gmeb1	14
ZNF143	14
NR2C2	14
ZBTB33	13
Foxo1	13
FOXH1	13
RXRG	12
Hic1;	12
SPIB	12
RXRB	12
EOMES	11
Dux	10
NFATC1	9
BCL6B	8
SREBF1	8
TEAD2	8
Bcl6	8
PDX1	8
RFX5	8
TBX1	8
FOXP1	8
Rarg	7
MYBL2	7
CDX2	7
ATF4	6
MEF2B	6
Ascl2	6
IRF1	6
CREB3	5
FOXP3	5
ZBTB18	5
Nkx3-1	5
NFIL3	5
TP73	5
TP53	5
MAFG::NFE2L1	5
GLI2	5
NR3C1	5
REST	5
Sox17	5
Rarb	4
Arid3a	4
Mecom	4
Ddit3::Cebpa	4
SRF	4
PPARG	3
Vdr	3
RFX2	3
PROX1	3
RXRA::VDR	3
CLOCK	3
GRHL1	3
Id2	3
Nr5a2	2
RORA(var.2)	2
HSF2	2
Rfx1	2
MEIS1	2
NKX2-3	2
LEF1	2
MEF2A	2
RORA	2
Creb3l2	2
Pitx1	2
Pax6	2
Tcfl5	2
HNF1B	1
E2F8	1
HOXA13	1
DUX4	1
HOXA5	1
Hes1	1
TFE3	1
Stat4	1
ISX	1
Klf12	1
SREBF2	1
HNF1A	1
MTF1	1