NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_TRAP_SRX1589764	number of peaks	42450
antibody	TRAP
cell line	HELA	Number of reads	35913167
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MYCN	1103
MYC	959
TFAP2A	841
MAX	820
ZNF740	815
SP1	789
NR2F1	739
TFAP2A-var.2	687
TAL1::TCF3	668
ZBTB7A	644
ERG	640
E2F1	628
FOXA1	598
EGR1	584
TCF4	582
Esrrg	570
Sox2	554
Tcf12	528
TCF3	528
TFAP2C	493
MAX::MYC	491
Gabpa	463
ZEB1	459
ELF1	459
RUNX1	450
YY1	400
Ar	392
NFKB1	380
STAT3	379
NFIC	374
CTCF	372
Foxa2	358
E2F4	358
Gata1	332
Esrra	326
MYBL1	307
E2F6	306
GATA3	306
ZNF263	304
SPI1	299
EBF1	295
KLF4	291
Hnf4a	286
GATA2	281
EGR2	266
USF2	258
REL	258
Gata4	252
TFAP2A-var.3	252
FLI1	251
ELF3	247
USF1	241
Rxra	239
BHLHE41	223
RELA	217
CEBPB	212
TEAD4	212
HEY1	211
ETS1	208
TFDP1	206
NRF1	205
Pparg::Rxra	205
OTX2	203
TCF7L2	203
Tcf21	191
KLF5	191
FOS	190
SP3	189
RUNX3	187
KLF9	185
BHLHE40	184
TFAP4	181
ELK1	176
Tcf7	175
GATA5	169
NFKB2	168
PBX1	162
STAT1::STAT2	160
FEV	154
NEUROD1	153
TEAD1	150
Klf1	146
NR1H2::RXRA	145
NFIA	136
ETV1	120
SOX9	116
POU5F1B	112
Arnt	111
TP63	104
HSF1	102
ETV6	100
JUND	100
ELK4	98
BATF::JUN	96
Hand1::Tcf3	94
GATA1::TAL1	93
SNAI2	91
CEBPA	91
SPIB	89
CREB1	87
THAP1	84
NR3C2	82
SMAD2::SMAD3::SMAD4	82
FOSL2	79
PAX5	76
MAFK	75
Pou5f1::Sox2	74
MEF2B	73
NFATC3	72
HNF4G	69
NR4A2	69
JUN	68
RUNX2	67
Foxo1	66
PRDM1	66
IRF1	64
ELK3	63
Dux	62
MAF::NFE2	62
Stat5a::Stat5b	62
ARNT::HIF1A	61
FOSL1	61
Arid3a	61
Ahr::Arnt	61
Foxj2	59
CEBPD	58
FOS::JUN	55
MYB	54
EOMES	54
STAT1	54
CDX2	53
Atf3	52
RARA::RXRA	52
ERF	51
Nfe2l2	50
NFE2	50
EGR4	48
Bach1::Mafk	48
Mafb	47
DUX4	46
Atf1	45
Nr1h3::Rxra	44
E2F3	44
Gmeb1	43
MEF2A	42
ETV3	42
NKX3-2	41
MAFG	41
TP73	41
NFYA	41
NFYB	40
PDX1	40
ZNF143	39
SP2	39
BCL6B	39
SRF	38
MAFF	37
SP4	33
HINFP	32
Gfi1b	32
ATF4	31
Arntl	31
Bcl6	30
REST	29
SCRT1	29
NFATC1	28
Vdr	28
HNF1B	27
EGR3	27
RXRB	27
BATF3	27
KLF13	26
CREB3L1	26
TEAD2	26
Srebf1(var.2)	24
RXRG	24
FOXP1	24
Hic1;	23
TP53	23
FOXH1	23
MYBL2	22
Nkx3-1	22
GMEB2	20
ETV4	20
TBX1	20
ZBTB33	19
Ddit3::Cebpa	19
GLI2	18
Rarg	16
XBP1	15
POU2F2	15
NR3C1	15
Mecom	14
Sox17	13
MAFG::NFE2L1	13
RORA(var.2)	12
JUNB	12
LEF1	11
MEF2D	11
GRHL1	11
NR2C2	11
PPARG	10
ZBTB18	10
NFIL3	9
Rarb	8
CREB3	8
BARX1	8
HNF1A	8
ELF5	7
FOXP3	7
SREBF1	7
RFX5	6
Nr5a2	6
MEIS1	6
SREBF2	5
RXRA::VDR	4
Alx4	4
Hoxa11	4
TBX19	4
HSF2	4
ISX	3
Ascl2	3
Id2	3
SMAD3	3
HOXA5	3
Creb3l2	3
RARA	3
PROX1	3
Pax6	2
SREBF2(var.2)	2
DBP	2
RORA	2
Arx	2
CLOCK	2
RFX2	2
HOXA13	2
Pitx1	2
TFE3	2
FOXO4	1
Klf12	1
HES5	1
E2F2	1
Tcfl5	1
Myod1	1
MIXL1	1
Hoxa9	1
ISL2	1
Hes1	1
HOXD13	1

Motif name

Number of overlap

1103

959

841

820

815