NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_POLII_SRX2198835	number of peaks	91454
antibody	POLII
cell line	HELA	Number of reads	35565150
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
MYCN	6159
MYC	6057
MAX	4473
SP1	4313
MAX::MYC	3009
E2F1	2906
TCF4	2632
ZNF740	2611
ERG	2566
TAL1::TCF3	2516
Gabpa	2310
ELF1	2221
Tcf12	2162
EGR1	2123
NR2F1	2111
E2F4	2025
TCF3	2000
EGR2	1841
ELK1	1812
Esrrg	1770
TFAP2C	1755
CTCF	1723
ZBTB7A	1693
FOS	1660
NRF1	1561
ETS1	1519
KLF4	1493
KLF5	1488
TFAP2A	1458
HEY1	1449
ZEB1	1431
YY1	1428
BHLHE41	1402
JUND	1284
FOSL2	1271
NFIC	1258
TFAP2A-var.2	1253
RUNX1	1232
BHLHE40	1219
USF1	1213
FOSL1	1194
USF2	1188
BATF::JUN	1162
ZNF263	1123
Esrra	1079
MYBL1	1060
JUN	1036
ETV1	1035
E2F6	1023
Atf3	1016
FOS::JUN	988
Ar	958
KLF9	951
STAT3	942
PBX1	880
TFDP1	834
Klf1	823
ELK4	797
FLI1	783
SP3	732
Sox2	715
ELK3	706
CREB1	669
Arnt	666
ERF	657
TEAD4	636
CEBPB	629
Tcf21	619
ETV3	610
FOXA1	598
POU5F1B	587
NFKB1	584
ETV6	583
Atf1	572
ELF3	553
Hnf4a	531
TFAP2A-var.3	517
PAX5	516
NEUROD1	510
ARNT::HIF1A	510
Rxra	487
EBF1	485
RUNX3	484
TFAP4	484
Pparg::Rxra	478
NFE2	463
SPI1	461
NR1H2::RXRA	458
Gata1	447
STAT1::STAT2	435
TEAD1	429
Nfe2l2	428
TP63	418
SOX9	393
E2F3	392
CEBPA	391
JUNB	390
MAF::NFE2	389
Foxa2	387
SMAD2::SMAD3::SMAD4	387
REL	386
THAP1	371
EGR4	362
CEBPD	361
SP4	325
BATF3	316
Gata4	315
XBP1	306
NFIA	302
RELA	300
Bach1::Mafk	290
MAFF	282
Ahr::Arnt	281
SP2	280
GATA3	280
Hand1::Tcf3	280
GATA2	274
MAFG	266
NFKB2	257
NFATC3	253
OTX2	249
RUNX2	247
NR3C2	244
GATA5	231
MAFK	227
NFYB	216
FEV	215
NFYA	214
SNAI2	200
Mafb	195
HNF4G	194
GMEB2	188
EGR3	177
ZNF143	172
RARA::RXRA	165
MYB	164
Foxj2	161
TCF7L2	155
Nr1h3::Rxra	154
HINFP	151
GATA1::TAL1	142
STAT1	138
Arntl	133
Hic1;	131
Tcf7	127
NR4A2	127
NKX3-2	122
Foxo1	112
Pou5f1::Sox2	110
HSF1	110
KLF13	105
Stat5a::Stat5b	103
ATF4	103
SCRT1	103
EOMES	98
TEAD2	96
FOXP1	92
Gmeb1	91
Ddit3::Cebpa	90
ETV4	88
TP53	87
ZBTB33	78
TP73	77
REST	76
FOXH1	75
BCL6B	74
PRDM1	74
Bcl6	73
RXRB	71
NFIL3	71
Rarg	70
NR2C2	68
IRF1	68
PDX1	67
Rarb	65
MAFG::NFE2L1	63
CREB3L1	63
CDX2	63
RXRG	62
Vdr	60
SREBF2	58
MEF2B	56
FOXP3	53
NFATC1	52
SPIB	52
TBX1	51
SREBF1	50
ELF5	46
CLOCK	44
Gfi1b	44
Dux	43
MYBL2	41
POU2F2	39
SRF	35
NR3C1	35
RFX5	33
ZBTB18	31
Tcfl5	31
Sox17	31
MEF2A	31
GLI2	30
CREB3	30
Arid3a	26
Ascl2	25
Nkx3-1	22
RXRA::VDR	18
GRHL1	17
Creb3l2	17
Pax6	17
PROX1	16
TBX19	15
HNF1B	14
PPARG	12
TBP	12
Mecom	12
DUX4	12
Hes1	12
Nr5a2	12
MEIS1	11
MEF2D	9
Id2	9
BARX1	8
SMAD3	8
RFX2	7
LEF1	7
Pitx1	6
HSF2	6
FOS::JUND	5
FOS::JUNB	5
HNF1A	4
HOXA13	4
HOXA5	4
Klf12	4
Rfx1	4
RORA	4
POU3F2	4
RORA(var.2)	4
RARA	4
E2F8	3
IRF2	3
ISX	3
NFIC::TLX1	3
HES5	3
FOXO4	3
Hoxa11	2
NKX2-3	2
NFAT5	2
MIXL1	2
Znf423	2
TFE3	2
Srebf1(var.2)	2
SREBF2(var.2)	1
Arx	1
FOS::JUN(var.2)	1
ATF7	1
ESR1	1
Nkx2-5-var.2	1
FOSB::JUN	1
DBP	1

Motif name

Number of overlap

6159

6057

4473

4313

3009