NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_HCF1C_SRX092568	number of peaks	7835
antibody	HCF1C
cell line	HELA	Number of reads	19058925
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
ELK1	2349
SP1	1682
ELF1	1666
ETS1	1657
ERG	1631
Gabpa	1518
E2F4	1425
E2F1	1340
ELK4	1193
ZBTB7A	1146
ETV1	1135
ERF	931
ELK3	901
ZNF740	853
MYCN	799
NRF1	747
YY1	732
KLF5	727
STAT3	708
ETV3	700
MYC	698
EGR2	696
EGR1	683
MYBL1	573
ETV6	571
Atf1	545
MAX	543
Esrrg	533
USF2	527
TFDP1	506
SP2	502
USF1	500
BHLHE40	488
NR2F1	477
SP3	398
CREB1	378
TFAP2A-var.2	368
NFYB	351
E2F3	341
NFYA	332
SP4	328
TAL1::TCF3	326
TFAP2C	321
TCF4	320
KLF4	312
SOX9	310
THAP1	305
NFIC	302
ELF3	299
XBP1	295
Tcf12	290
Klf1	281
ZNF143	271
ZEB1	267
TFAP2A	253
CTCF	252
E2F6	250
TCF3	247
STAT1::STAT2	236
GMEB2	233
MAX::MYC	230
HEY1	230
NFATC3	224
BATF3	213
PAX5	201
FLI1	197
Arnt	186
RUNX1	183
Esrra	180
Sox2	179
RUNX3	172
TFAP2A-var.3	170
Pparg::Rxra	168
KLF9	166
Rxra	165
NR1H2::RXRA	164
FEV	163
EGR4	162
BHLHE41	155
SPI1	145
STAT1	141
Ar	126
NKX3-2	125
ARNT::HIF1A	123
MYB	119
ZNF263	117
RELA	116
Tcf21	116
EBF1	114
NFKB1	112
TFAP4	112
Hnf4a	109
CEBPD	100
NR4A2	97
Arntl	95
Gmeb1	92
Stat5a::Stat5b	88
ZBTB33	87
NEUROD1	87
REL	86
RUNX2	83
EGR3	82
TEAD4	81
NFIA	80
FOXA1	72
POU5F1B	72
CEBPB	72
HINFP	72
KLF13	72
SREBF1	70
ETV4	68
TEAD1	67
SREBF2	65
FOS	64
SMAD2::SMAD3::SMAD4	64
PBX1	62
TP63	62
BATF::JUN	62
Ahr::Arnt	62
NFKB2	62
OTX2	60
Atf3	59
GATA3	58
NR2C2	57
HSF1	53
FOSL2	52
ELF5	51
FOSL1	51
Gata1	51
HNF4G	49
JUN	49
JUND	48
SNAI2	48
CEBPA	48
GATA5	44
FOS::JUN	43
RARA::RXRA	43
ATF4	42
MAF::NFE2	42
Foxj2	41
CLOCK	40
Hand1::Tcf3	39
GATA2	39
Gata4	39
Nfe2l2	39
Foxa2	39
Nr1h3::Rxra	38
EOMES	36
NFE2	35
TBX1	32
RXRB	31
PDX1	31
Bach1::Mafk	30
TEAD2	28
CREB3L1	28
RXRG	28
Foxo1	27
Pou5f1::Sox2	27
NR3C2	26
Arid3a	26
CREB3	26
RFX5	25
Rarb	25
BCL6B	25
Rarg	25
TCF7L2	25
Mafb	24
FOXP1	24
SPIB	24
NFATC1	23
NFIL3	22
Tcf7	21
JUNB	21
Bcl6	21
IRF1	20
GATA1::TAL1	19
FOXP3	19
CDX2	19
Hic1;	19
MAFF	18
Dux	17
FOXH1	16
Ddit3::Cebpa	16
Vdr	15
TP53	14
Nkx3-1	14
Creb3l2	13
Sox17	12
SCRT1	12
PRDM1	11
Gfi1b	11
MAFK	11
NR3C1	10
PROX1	10
MYBL2	10
GLI2	10
MAFG	10
Ascl2	10
RFX2	9
Id2	9
TP73	9
Hes1	8
SRF	7
POU2F2	7
REST	6
LEF1	6
MEIS1	5
MIXL1	5
ZBTB18	4
GRHL1	4
RXRA::VDR	4
PPARG	4
Pax6	4
DUX4	3
MEF2A	3
RORA(var.2)	3
RORA	3
E2F8	3
Mecom	3
BARX1	3
HES5	3
SMAD3	2
HSF2	2
Klf12	2
MEF2B	2
TBX19	2
DBP	2
HOXA5	2
Rfx1	2
ATF7	2
HOXA13	2
IRF2	2
Hoxa11	1
FOS::JUND	1
MEF2D	1
FOSB::JUN	1
MAFG::NFE2L1	1
E2F2	1
HNF1B	1
Srebf1(var.2)	1
NKX2-3	1
FOS::JUN(var.2)	1
SREBF2(var.2)	1
TBP	1
MTF1	1
Pitx1	1
NFIC::TLX1	1

Motif name

Number of overlap

2349

1682

1666

1657

1631