NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023662	number of peaks	12784
antibody	GFP
cell line	HELA	Number of reads	10244829
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	2750
MYC	1178
MYCN	1090
SP1	876
Tcf12	817
TCF4	757
TAL1::TCF3	699
NFIC	655
ZEB1	632
NR2F1	579
TCF3	562
ZBTB7A	557
E2F4	544
ERG	506
STAT3	497
MYBL1	492
ELK1	452
Gabpa	445
ELF1	418
MAX	407
E2F1	402
ZNF740	398
RUNX1	385
Esrrg	383
TFAP2A	373
TFAP2C	367
Sox2	344
YY1	325
TFAP2A-var.2	313
EGR1	299
EGR2	298
MAX::MYC	294
RUNX3	283
ETS1	272
TEAD4	261
NR1H2::RXRA	256
Rxra	236
Pparg::Rxra	233
FOXA1	226
TFAP4	223
FOS	220
KLF4	217
BHLHE41	216
USF2	209
KLF5	206
ELK4	202
ETV1	202
Ar	198
TEAD1	196
NRF1	195
ZNF263	194
USF1	184
Esrra	183
SOX9	183
Hnf4a	181
NEUROD1	176
BHLHE40	170
FOSL2	168
THAP1	162
STAT1::STAT2	162
PBX1	161
BATF::JUN	161
NFKB1	159
CEBPB	158
TFAP2A-var.3	156
Foxa2	152
E2F6	149
JUND	147
FOSL1	146
Atf3	146
ETV3	145
Tcf21	145
EBF1	144
Gata1	143
E2F3	141
FLI1	141
HEY1	140
GATA3	140
RELA	138
ETV6	138
OTX2	135
Nr1h3::Rxra	132
ERF	131
JUN	130
NFIA	125
PAX5	122
FOS::JUN	120
CEBPA	119
REL	116
SP3	115
ELK3	111
CEBPD	109
TFDP1	108
ELF3	107
Gata4	107
KLF9	105
Klf1	104
Atf1	101
STAT1	100
GATA2	99
SPI1	98
NKX3-2	96
SMAD2::SMAD3::SMAD4	93
RUNX2	92
ZNF143	90
CREB1	89
POU5F1B	89
NFYB	88
SP4	85
TCF7L2	84
TEAD2	82
NFYA	81
TP63	81
Arid3a	80
GATA5	79
Arnt	78
NFKB2	77
Stat5a::Stat5b	75
Foxj2	74
Hand1::Tcf3	73
FEV	71
HSF1	71
Tcf7	70
MYB	69
NFATC3	69
HNF4G	68
Foxo1	65
NFE2	65
SP2	62
ARNT::HIF1A	57
NR4A2	57
REST	56
Pou5f1::Sox2	55
Nfe2l2	54
MAFK	53
Mafb	52
RARA::RXRA	52
MAF::NFE2	51
Bach1::Mafk	50
BCL6B	48
Ahr::Arnt	47
PDX1	47
JUNB	46
EOMES	46
BATF3	45
CDX2	45
MAFF	44
MEF2B	42
XBP1	41
Vdr	41
KLF13	40
EGR4	36
NR3C2	36
Bcl6	36
TBX1	35
GATA1::TAL1	34
MYBL2	33
TP53	32
ATF4	32
SCRT1	31
SPIB	30
MAFG	29
SRF	29
Hic1;	29
ZBTB18	28
Gfi1b	28
Gmeb1	27
PRDM1	27
FOXP1	26
HINFP	26
MEF2A	25
IRF1	23
SNAI2	23
SREBF2	21
Ddit3::Cebpa	21
Arntl	21
GMEB2	21
NFIL3	20
ELF5	20
Nkx3-1	20
RXRB	19
Rarg	19
SREBF1	18
FOXH1	18
POU2F2	17
NFATC1	17
EGR3	16
ETV4	16
PPARG	14
Ascl2	14
Dux	14
NR2C2	13
Mecom	13
FOXP3	13
RXRG	13
Rarb	11
RFX5	11
ZBTB33	11
RXRA::VDR	11
NR3C1	10
TP73	10
Sox17	9
CREB3L1	9
DUX4	8
GLI2	8
PROX1	7
HNF1B	7
TBX19	7
CREB3	6
CLOCK	6
MEF2D	4
Creb3l2	4
RFX2	4
RARA	4
GRHL1	4
MAFG::NFE2L1	4
MEIS1	3
SMAD3	3
HSF2	3
FOS::JUND	3
HOXA13	3
RORA	3
MIXL1	3
RORA(var.2)	3
Nr5a2	3
BARX1	3
FOS::JUNB	3
HNF1A	3
HES5	2
Pax6	2
ATF7	2
HOXA5	2
Alx4	1
SOX4	1
E2F2	1
NFIC::TLX1	1
Hes1	1
ISX	1
Nkx2-5-var.2	1
DBP	1
LEF1	1
NFAT5	1
IRF2	1
Sox1	1
Arx	1
FOXO4	1
SREBF2(var.2)	1
Id2	1
HOXB13	1
NKX2-3	1
Pitx1	1

Motif name

Number of overlap

2750

1178

1090

876

817