NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023657	number of peaks	17247
antibody	GFP
cell line	HELA	Number of reads	26604582
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	1411
FOS	882
ERG	854
MYC	839
CEBPB	837
STAT3	830
MYCN	819
FOXA1	786
NR2F1	767
ELK1	759
TEAD4	759
NFIC	751
MYBL1	742
Gabpa	701
SP1	696
BATF::JUN	695
ELF1	692
Sox2	677
FOSL2	669
Tcf12	644
JUND	607
ZBTB7A	606
FOSL1	600
TFAP2A	566
JUN	561
TEAD1	557
E2F4	554
Foxa2	549
TAL1::TCF3	543
MAX	539
Atf3	538
PBX1	536
Esrrg	533
FOS::JUN	532
RUNX1	527
ETS1	498
CEBPA	495
TCF4	487
GATA3	462
TCF3	461
ELK4	435
ZEB1	421
TFAP2C	383
E2F1	382
CEBPD	351
Ar	348
USF2	335
YY1	334
Gata1	329
TFAP2A-var.2	329
ZNF740	328
Esrra	328
Pparg::Rxra	323
Rxra	316
ETV1	314
RUNX3	302
GATA2	290
ERF	289
MAX::MYC	284
NR1H2::RXRA	281
CREB1	275
USF1	271
EGR2	264
Gata4	263
KLF4	263
RELA	256
Hnf4a	254
ELF3	253
BHLHE40	249
EGR1	248
ETV6	248
TFAP4	246
ETV3	246
NFKB1	243
Tcf21	237
NFE2	236
Atf1	234
KLF5	233
GATA5	230
Nfe2l2	228
STAT1::STAT2	216
Arid3a	215
ELK3	214
TP63	209
JUNB	209
SOX9	206
TCF7L2	206
Foxj2	203
NFIA	201
REL	195
NKX3-2	195
CDX2	195
Foxo1	194
OTX2	190
NRF1	187
TFDP1	186
FLI1	182
Tcf7	181
HEY1	177
SPI1	175
MAF::NFE2	172
MAFK	157
EBF1	154
MAFF	149
NEUROD1	148
POU5F1B	144
FEV	143
BHLHE41	142
ZNF263	142
RUNX2	141
SP3	139
HSF1	139
ATF4	136
Arnt	135
Nr1h3::Rxra	128
MAFG	128
ZNF143	128
BATF3	127
PAX5	126
E2F3	122
STAT1	122
TFAP2A-var.3	121
Klf1	120
E2F6	120
Bach1::Mafk	119
Mafb	118
THAP1	118
NFKB2	117
MEF2B	115
KLF9	110
NFATC3	108
PRDM1	100
Pou5f1::Sox2	100
PDX1	100
TEAD2	99
NFYB	99
Hand1::Tcf3	98
SMAD2::SMAD3::SMAD4	96
NFIL3	95
NFYA	90
Stat5a::Stat5b	90
NR3C2	88
Ddit3::Cebpa	87
MYB	86
HNF4G	84
SP2	84
Gfi1b	84
ARNT::HIF1A	84
XBP1	82
MYBL2	80
GATA1::TAL1	79
NR4A2	78
FOXP1	76
Nkx3-1	72
SP4	70
RARA::RXRA	67
Vdr	64
MEF2A	62
Ahr::Arnt	62
GMEB2	57
Gmeb1	54
EOMES	52
BCL6B	51
ETV4	49
Arntl	48
ZBTB33	48
SPIB	44
IRF1	44
Bcl6	43
RXRB	42
SRF	41
EGR4	41
TP73	41
TP53	39
TBX1	37
MAFG::NFE2L1	37
Hic1;	37
KLF13	37
Dux	37
SCRT1	37
RXRG	36
NFATC1	35
ELF5	34
REST	33
SREBF2	33
HNF1B	30
ZBTB18	28
SREBF1	28
FOXP3	28
DUX4	28
Mecom	27
HINFP	27
RFX5	25
NR2C2	24
Sox17	24
POU2F2	24
NR3C1	24
CREB3	21
PPARG	20
Rarb	20
Srebf1(var.2)	20
Rarg	19
EGR3	18
RORA(var.2)	18
GRHL1	18
MEF2D	16
MEIS1	16
CREB3L1	16
SNAI2	15
RXRA::VDR	13
FOXH1	13
CLOCK	13
GLI2	11
Pax6	11
BARX1	11
HNF1A	10
FOS::JUND	10
HOXA13	9
LEF1	9
RARA	8
FOS::JUNB	8
Ascl2	8
E2F8	7
FOXO4	7
RORA	6
Nr5a2	6
TBX19	5
PROX1	5
Creb3l2	5
Rfx1	4
Arx	4
HSF2	4
Hes1	4
FOS::JUN(var.2)	3
MIXL1	3
DBP	3
Hoxa9	3
Hoxa11	2
RFX2	2
TBP	2
IRF2	2
FOSB::JUN	2
HOXA5	2
SMAD3	1
NFAT5	1
Pitx1	1
E2F2	1
HES5	1
PAX3	1
Id2	1
Stat4	1
NFIC::TLX1	1
Alx4	1

Motif name

Number of overlap

1411

882

854

839

837