NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023653	number of peaks	24267
antibody	GFP
cell line	HELA	Number of reads	4627153
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Tcf12	1433
TAL1::TCF3	1365
SP1	1313
MYCN	1280
MYC	1255
TCF3	1174
TCF4	1145
E2F1	1091
ZNF740	993
ZBTB7A	975
ERG	923
CTCF	883
E2F4	852
Tcf21	844
TFAP2A	836
NR2F1	826
ELK1	817
Gabpa	797
ELF1	788
EGR1	764
TFAP4	737
FOS	729
MAX	718
TFAP2C	708
TFAP2A-var.2	675
NFIC	662
ZEB1	635
ETS1	610
BATF::JUN	588
FOSL2	587
BHLHE41	568
Esrrg	559
STAT3	556
JUND	549
EGR2	537
FOSL1	533
JUN	510
KLF5	509
Atf3	496
FOS::JUN	488
MYBL1	477
PBX1	472
MAX::MYC	471
YY1	458
ETV1	456
KLF4	440
ELK4	435
TEAD4	414
BHLHE40	409
USF2	400
NRF1	399
TFDP1	382
Sox2	374
NEUROD1	360
RUNX1	360
E2F6	330
TEAD1	329
SP3	327
USF1	318
HEY1	318
Esrra	316
ELK3	315
ZNF263	314
NFKB1	313
FOXA1	302
Klf1	298
Rxra	292
Pparg::Rxra	287
CEBPB	284
TFAP2A-var.3	272
KLF9	270
ERF	265
NR1H2::RXRA	259
FLI1	257
ETV3	244
CEBPA	243
ETV6	242
RELA	241
REL	235
EBF1	232
Hnf4a	231
NFE2	226
CEBPD	220
CREB1	215
Nfe2l2	215
Foxa2	206
SOX9	206
STAT1::STAT2	206
JUNB	202
Ar	200
ELF3	200
RUNX3	198
OTX2	189
NFIA	183
FEV	179
GATA3	178
Gata1	176
MAF::NFE2	172
Atf1	172
E2F3	169
SPI1	169
NFKB2	161
THAP1	160
GATA2	160
PAX5	156
Arnt	154
NFATC3	152
MAFF	152
Gata4	151
GATA5	147
SP2	144
MAFK	142
Hand1::Tcf3	136
TP63	133
SMAD2::SMAD3::SMAD4	130
SP4	129
MAFG	128
Bach1::Mafk	127
NFYB	124
TCF7L2	121
RUNX2	120
NFYA	119
ARNT::HIF1A	113
NR4A2	112
Foxj2	106
Tcf7	99
STAT1	96
BATF3	96
NKX3-2	96
XBP1	94
EGR4	93
Ahr::Arnt	91
Nr1h3::Rxra	90
HNF4G	88
Foxo1	87
POU5F1B	86
Arntl	83
Stat5a::Stat5b	83
Mafb	79
SNAI2	79
MYB	77
RARA::RXRA	75
HSF1	73
ZNF143	72
Gmeb1	69
ATF4	69
NR3C2	68
TEAD2	63
FOXP1	60
PDX1	59
NFIL3	58
HINFP	57
GMEB2	57
KLF13	56
GATA1::TAL1	55
ETV4	55
CDX2	54
SPIB	54
MEF2B	49
BCL6B	47
Arid3a	47
Hic1;	47
Ddit3::Cebpa	47
EGR3	46
PRDM1	44
Bcl6	41
RXRB	38
EOMES	37
CREB3L1	36
MAFG::NFE2L1	36
MYBL2	36
REST	36
ZBTB18	35
RXRG	35
CLOCK	35
Pou5f1::Sox2	34
Gfi1b	34
MEF2A	33
ZBTB33	31
TBX1	30
SRF	29
TP53	29
IRF1	29
GLI2	29
TP73	28
SCRT1	28
NR2C2	27
FOXH1	27
SREBF2	25
Vdr	24
PPARG	24
NFATC1	22
FOXP3	22
Rarg	21
Nkx3-1	21
RFX5	21
NR3C1	18
SREBF1	18
Rarb	16
Sox17	15
POU2F2	15
Dux	15
Mecom	15
GRHL1	14
ELF5	14
Ascl2	12
CREB3	12
MEIS1	11
BARX1	11
HNF1B	10
DUX4	8
RXRA::VDR	8
TBX19	8
Hes1	7
Id2	6
Srebf1(var.2)	6
PROX1	5
Nr5a2	5
SMAD3	5
Rfx1	5
RORA(var.2)	5
LEF1	4
MEF2D	4
Creb3l2	4
Pax6	4
HSF2	3
MIXL1	3
HOXA13	3
RFX2	3
IRF2	3
RORA	3
E2F8	3
FOS::JUND	3
Arx	2
Hoxa11	2
HOXA5	2
NFAT5	2
FOS::JUNB	2
NKX2-3	2
Pitx1	2
Klf12	1
TFEB	1
SREBF2(var.2)	1
FOS::JUN(var.2)	1
FOXO4	1
Hoxa9	1
Alx4	1
TFE3	1
MTF1	1
DBP	1
HOXB13	1
IRF9	1
Nkx2-5-var.2	1

Motif name

Number of overlap

1433

1365

1313

1280

1255