NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023652	number of peaks	25474
antibody	GFP
cell line	HELA	Number of reads	7343475
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	2295
MYCN	1884
MYC	1779
SP1	1504
MAX	1141
Tcf12	1038
E2F1	1027
E2F4	1005
NR2F1	964
TAL1::TCF3	961
TCF4	959
ERG	958
ZNF740	894
ELK1	883
ZBTB7A	876
ELF1	847
Gabpa	838
NFIC	835
TFAP2A	820
MAX::MYC	802
TCF3	740
ZEB1	731
TFAP2C	731
STAT3	696
FOS	681
EGR1	668
Esrrg	645
MYBL1	622
TEAD4	616
TFAP2A-var.2	601
EGR2	599
ETS1	563
FOSL2	558
USF2	553
BATF::JUN	529
Sox2	521
JUND	514
FOSL1	511
KLF5	500
YY1	488
BHLHE40	487
KLF4	479
Atf3	476
RUNX1	470
ELK4	465
TEAD1	460
JUN	439
ETV1	437
FOS::JUN	437
PBX1	433
NRF1	433
FOXA1	397
E2F6	374
Esrra	372
BHLHE41	370
USF1	369
TFDP1	368
Rxra	366
Pparg::Rxra	363
HEY1	357
ZNF263	346
NFKB1	345
NR1H2::RXRA	339
SP3	333
ELK3	321
CEBPB	319
TFAP4	314
Ar	308
Tcf21	303
RUNX3	295
Foxa2	292
RELA	286
ERF	285
Hnf4a	285
TFAP2A-var.3	281
GATA3	278
SOX9	277
Klf1	275
CREB1	271
ETV6	267
CEBPA	266
FLI1	260
REL	259
Gata1	258
ELF3	254
ETV3	251
STAT1::STAT2	248
Arnt	247
KLF9	243
NEUROD1	239
E2F3	235
Gata4	233
Atf1	231
GATA2	231
CEBPD	229
EBF1	228
NFIA	228
OTX2	211
THAP1	191
NFE2	191
NFKB2	186
PAX5	185
JUNB	184
GATA5	181
NFYB	176
SPI1	173
Nfe2l2	171
Nr1h3::Rxra	168
TP63	164
SP2	158
TCF7L2	158
SP4	158
ARNT::HIF1A	156
NFYA	155
SMAD2::SMAD3::SMAD4	152
Foxj2	150
MAFF	144
FEV	144
POU5F1B	140
RUNX2	136
MAF::NFE2	134
Tcf7	130
NFATC3	127
BATF3	126
Foxo1	125
Hand1::Tcf3	124
STAT1	121
MAFK	120
MAFG	120
HSF1	118
XBP1	116
NKX3-2	115
Bach1::Mafk	112
EGR4	109
Stat5a::Stat5b	107
Arntl	106
TEAD2	104
Ahr::Arnt	103
HNF4G	101
NR3C2	97
MYB	96
ZNF143	86
Mafb	84
NR4A2	81
GMEB2	79
CDX2	79
MEF2B	77
RARA::RXRA	76
Arid3a	74
KLF13	74
SNAI2	72
GATA1::TAL1	71
Pou5f1::Sox2	67
MYBL2	66
EOMES	64
NFIL3	64
BCL6B	64
FOXP1	63
PRDM1	63
PDX1	62
ATF4	59
Gmeb1	59
ETV4	57
RXRB	54
HINFP	53
Bcl6	50
SPIB	50
Ddit3::Cebpa	50
EGR3	49
REST	48
TP53	47
MEF2A	46
Vdr	46
Hic1;	46
RXRG	45
TBX1	44
ZBTB33	39
FOXH1	35
Gfi1b	35
SRF	34
CLOCK	34
SCRT1	33
NR2C2	33
NFATC1	33
IRF1	30
SREBF1	30
SREBF2	30
FOXP3	30
Rarg	29
CREB3L1	28
Nkx3-1	28
ZBTB18	28
TP73	27
MAFG::NFE2L1	24
Dux	23
ELF5	22
GLI2	21
Sox17	20
Mecom	17
CREB3	17
Rarb	17
Ascl2	17
NR3C1	17
POU2F2	15
RFX5	14
Hes1	12
DUX4	12
PPARG	12
HNF1B	11
MEF2D	11
GRHL1	11
MEIS1	11
BARX1	10
RXRA::VDR	10
TBX19	10
FOS::JUND	9
Nr5a2	8
PROX1	7
Creb3l2	7
LEF1	7
FOS::JUNB	6
RARA	6
RFX2	5
MIXL1	5
RORA(var.2)	5
HSF2	5
SMAD3	5
E2F8	4
Rfx1	4
Pax6	4
HOXA13	4
HNF1A	4
Arx	4
Alx4	4
Srebf1(var.2)	3
Hoxa11	3
FOXO4	3
HES5	3
HOXA5	2
Id2	2
RORA	2
Pitx1	2
Hes2	1
Sox1	1
Arid3b	1
DBP	1
FOS::JUN(var.2)	1
POU3F2	1
NFIC::TLX1	1
Stat4	1
Myod1	1
Hoxa9	1
TFE3	1
FOSB::JUN	1
ATF7	1

Motif name

Number of overlap

2295

1884

1779

1504

1141