NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023651	number of peaks	25474
antibody	GFP
cell line	HELA	Number of reads	10508540
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	3737
MYC	1724
MYCN	1686
SP1	1437
Tcf12	1242
TCF4	1100
TAL1::TCF3	1043
NR2F1	1041
ZBTB7A	1031
NFIC	1022
E2F4	1000
ERG	923
ZEB1	915
E2F1	879
TCF3	859
ELK1	846
STAT3	831
Gabpa	820
MYBL1	803
ELF1	803
MAX	759
ZNF740	731
TFAP2A	729
TFAP2C	674
Sox2	670
YY1	661
Esrrg	652
RUNX1	610
TFAP2A-var.2	605
EGR1	558
FOS	542
ETS1	522
EGR2	516
TEAD4	479
FOXA1	477
MAX::MYC	472
RUNX3	433
KLF4	430
FOSL2	423
BATF::JUN	411
Rxra	406
Pparg::Rxra	392
NR1H2::RXRA	389
ELK4	386
NRF1	376
ETV1	376
NFKB1	374
JUND	371
TFAP4	365
FOSL1	364
USF2	358
ZNF263	355
Atf3	353
TEAD1	352
KLF5	348
BHLHE41	345
JUN	335
PBX1	332
Esrra	332
BHLHE40	326
CEBPB	326
Foxa2	324
Hnf4a	323
Tcf21	322
E2F6	316
Ar	316
FOS::JUN	315
USF1	310
RELA	293
HEY1	291
TFDP1	284
SOX9	283
TFAP2A-var.3	278
NEUROD1	278
CEBPA	277
EBF1	272
REL	270
STAT1::STAT2	268
GATA3	264
Gata1	261
ELK3	253
ETV3	250
CEBPD	246
ETV6	244
THAP1	244
OTX2	243
ELF3	235
SP3	233
FLI1	229
ERF	221
CREB1	219
Gata4	210
SPI1	202
NFIA	201
GATA2	200
KLF9	192
Nr1h3::Rxra	191
Arnt	191
Klf1	189
E2F3	187
Atf1	185
PAX5	177
Foxj2	176
TP63	171
NFKB2	170
GATA5	164
TCF7L2	157
FEV	157
NFYB	156
NFYA	151
SMAD2::SMAD3::SMAD4	151
NFE2	149
NKX3-2	144
NFATC3	140
POU5F1B	139
Nfe2l2	136
Hand1::Tcf3	135
RUNX2	134
STAT1	133
ARNT::HIF1A	132
Foxo1	131
SP4	131
Arid3a	130
Tcf7	128
HNF4G	121
Stat5a::Stat5b	118
HSF1	117
JUNB	113
SP2	112
ZNF143	112
TEAD2	109
MAFF	109
MAF::NFE2	109
BATF3	104
MAFK	103
Mafb	103
NR4A2	102
MYB	102
PDX1	100
MAFG	93
CDX2	91
Pou5f1::Sox2	91
RARA::RXRA	90
NR3C2	90
Bach1::Mafk	90
XBP1	89
FOXP1	80
GATA1::TAL1	77
Ahr::Arnt	76
EOMES	74
BCL6B	72
MYBL2	72
Gmeb1	70
MEF2B	68
PRDM1	68
KLF13	68
ATF4	68
EGR4	65
REST	65
Bcl6	64
NFIL3	62
Vdr	62
TP53	54
TBX1	54
GMEB2	53
SNAI2	52
SPIB	48
Gfi1b	47
HINFP	47
ETV4	47
Ddit3::Cebpa	46
IRF1	45
Hic1;	44
SCRT1	44
RXRB	43
FOXP3	43
Arntl	42
ZBTB18	40
SRF	38
MEF2A	38
RXRG	36
NR2C2	35
Nkx3-1	34
FOXH1	33
ZBTB33	33
Dux	32
POU2F2	31
ELF5	29
SREBF1	28
Rarg	27
SREBF2	26
Sox17	26
CREB3L1	25
EGR3	23
NFATC1	23
GLI2	23
RFX5	22
DUX4	21
TP73	21
Rarb	20
NR3C1	20
CREB3	17
PPARG	17
Mecom	16
GRHL1	16
MAFG::NFE2L1	16
CLOCK	14
Ascl2	14
PROX1	14
HNF1B	13
RXRA::VDR	12
Srebf1(var.2)	11
Nr5a2	10
Pax6	10
MEF2D	9
RORA(var.2)	8
HSF2	7
BARX1	7
LEF1	7
SMAD3	7
RARA	6
MEIS1	6
RFX2	6
Hes1	5
TBX19	5
Pitx1	4
FOS::JUND	4
Id2	4
HOXA13	4
FOS::JUNB	4
Creb3l2	4
HNF1A	3
FOS::JUN(var.2)	3
Rfx1	3
HOXA5	3
Alx4	3
FOXO4	3
RORA	3
E2F8	2
NFAT5	2
ISX	2
ATF7	2
MIXL1	2
Hoxa11	2
SOX4	1
IRF2	1
FOSB::JUN	1
Arx	1
Sox1	1
Stat6	1
TBP	1
POU3F2	1
Stat4	1
TFEB	1
NFIC::TLX1	1
Myod1	1
HES5	1
HOXB13	1

Motif name

Number of overlap

3737

1724

1686

1437

1242