NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023650	number of peaks	13886
antibody	GFP
cell line	HELA	Number of reads	11964393
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	1933
MYC	951
MYCN	925
E2F4	803
SP1	747
Tcf12	697
ERG	647
E2F1	633
ZBTB7A	622
NFIC	622
NR2F1	616
TCF4	592
ELK1	588
TAL1::TCF3	580
STAT3	572
Gabpa	564
ELF1	562
MYBL1	552
MAX	484
TCF3	473
ZEB1	466
Sox2	462
Esrrg	446
TFAP2A	437
TEAD4	417
ETS1	404
FOS	395
RUNX1	388
TFAP2C	379
FOXA1	348
ELK4	343
ZNF740	340
YY1	334
FOSL2	320
TEAD1	305
MAX::MYC	301
BATF::JUN	300
TFAP2A-var.2	290
ETV1	280
FOSL1	280
E2F6	276
EGR2	274
TFDP1	274
KLF4	271
JUND	267
Atf3	264
USF2	264
CEBPB	263
Foxa2	262
Rxra	261
Esrra	256
Pparg::Rxra	256
PBX1	255
JUN	251
EGR1	246
NR1H2::RXRA	242
RUNX3	237
GATA3	234
FOS::JUN	225
Gata1	220
TFAP4	218
BHLHE40	218
ETV3	217
CEBPA	215
USF1	205
E2F3	205
Ar	204
SOX9	202
KLF5	197
ERF	197
STAT1::STAT2	195
Hnf4a	194
NFKB1	192
BHLHE41	191
ZNF263	190
CEBPD	187
RELA	187
ELK3	184
ELF3	182
ETV6	182
OTX2	179
CREB1	174
HEY1	173
NRF1	173
GATA2	172
Tcf21	172
Gata4	171
REL	163
NFIA	159
NEUROD1	158
FLI1	151
Atf1	149
SP3	147
TP63	145
GATA5	142
EBF1	138
THAP1	136
SPI1	136
TCF7L2	129
Arnt	126
NKX3-2	125
Klf1	124
TFAP2A-var.3	121
PAX5	119
Arid3a	116
Foxj2	113
POU5F1B	110
STAT1	109
KLF9	109
FEV	108
NFE2	105
SMAD2::SMAD3::SMAD4	104
NFKB2	103
Tcf7	103
Nr1h3::Rxra	98
Nfe2l2	98
Foxo1	98
NFYA	96
BATF3	96
JUNB	93
Hand1::Tcf3	92
NFYB	89
RUNX2	87
NR4A2	87
ARNT::HIF1A	82
SP2	81
MYB	81
TEAD2	81
HSF1	81
MAFK	79
Stat5a::Stat5b	79
ZNF143	79
CDX2	78
NFATC3	73
REST	72
Mafb	71
ZBTB33	71
MAFF	71
XBP1	70
MAF::NFE2	69
SP4	67
HNF4G	66
Pou5f1::Sox2	66
MAFG	63
NR3C2	61
GATA1::TAL1	59
BCL6B	56
PDX1	55
RARA::RXRA	55
Bach1::Mafk	55
Gfi1b	53
Ahr::Arnt	51
EGR4	50
ATF4	49
Bcl6	48
MEF2B	48
FOXP1	47
PRDM1	46
Gmeb1	45
Ddit3::Cebpa	45
NFIL3	44
MYBL2	41
GMEB2	41
Hic1;	40
Vdr	40
TP53	40
KLF13	39
ETV4	37
TP73	37
EOMES	36
SCRT1	35
Arntl	35
TBX1	32
HINFP	31
CREB3L1	29
Nkx3-1	29
SRF	29
SPIB	28
RXRB	27
NFATC1	26
MEF2A	26
Dux	22
SREBF2	22
ZBTB18	22
FOXP3	22
Rarg	21
RXRG	20
SREBF1	20
ELF5	20
IRF1	20
EGR3	19
PPARG	18
CREB3	18
FOXH1	17
Mecom	16
RFX5	16
CLOCK	16
Sox17	15
NR3C1	15
BARX1	13
POU2F2	13
SNAI2	12
MAFG::NFE2L1	11
DUX4	11
NR2C2	10
Creb3l2	10
Rarb	9
LEF1	8
GRHL1	8
GLI2	8
Ascl2	7
MEIS1	7
RORA(var.2)	5
RXRA::VDR	5
Srebf1(var.2)	5
E2F8	5
Nr5a2	5
HNF1B	5
HOXA13	4
MEF2D	4
PROX1	4
FOS::JUND	4
RARA	4
Rfx1	3
Arx	3
Pax6	3
DBP	3
FOS::JUNB	3
Id2	3
TBX19	3
TBP	2
MIXL1	2
HSF2	2
Pitx1	2
NFAT5	2
FOXO4	1
ISX	1
FOS::JUN(var.2)	1
Myod1	1
RFX2	1
POU3F2	1
Hoxa9	1
Hoxa11	1
NFIC::TLX1	1
Alx4	1
PAX3	1
Sox1	1
ISL2	1
E2F2	1
TFEB	1
FOSB::JUN	1
RORA	1
HOXA5	1

Motif name

Number of overlap

1933

951

925

803

747