NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_GFP_SRX023649	number of peaks	28139
antibody	GFP
cell line	HELA	Number of reads	5106287
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	2013
CTCF	2002
MYCN	1747
MYC	1741
Tcf12	1564
TAL1::TCF3	1436
TCF4	1340
E2F1	1335
ELK1	1311
ZNF740	1301
ERG	1282
E2F4	1277
ZBTB7A	1254
NR2F1	1196
TCF3	1180
ELF1	1113
Gabpa	1107
TFAP2A	1066
NFIC	1050
TFAP2C	1013
MAX	977
ETS1	905
ZEB1	900
FOS	888
EGR1	886
TFAP2A-var.2	864
STAT3	811
EGR2	780
MYBL1	757
BATF::JUN	745
FOSL2	742
KLF5	738
ELK4	735
Esrrg	728
TEAD4	713
JUND	700
FOSL1	696
Tcf21	683
ETV1	654
Atf3	640
KLF4	629
JUN	619
YY1	610
Sox2	609
FOS::JUN	606
MAX::MYC	604
USF2	589
BHLHE41	580
TFAP4	564
BHLHE40	554
PBX1	548
TEAD1	542
NRF1	535
RUNX1	505
Esrra	504
SP3	497
TFDP1	484
USF1	482
ELK3	476
ERF	450
FOXA1	448
Rxra	431
Pparg::Rxra	424
Klf1	421
HEY1	419
ETV3	419
CEBPB	413
ZNF263	404
E2F6	401
NR1H2::RXRA	394
NFKB1	393
ETV6	373
TFAP2A-var.3	368
CREB1	367
Hnf4a	353
CEBPA	350
SOX9	348
KLF9	347
NEUROD1	344
Atf1	337
FLI1	335
Foxa2	335
GATA3	326
RELA	326
RUNX3	315
CEBPD	308
Ar	308
Gata1	297
REL	286
ELF3	286
EBF1	281
NFIA	278
STAT1::STAT2	273
SP2	271
THAP1	270
NFE2	264
Gata4	259
JUNB	256
E2F3	253
SP4	251
Arnt	248
Nfe2l2	246
GATA2	240
OTX2	232
NFYB	226
GATA5	223
SPI1	216
FEV	209
NFYA	207
NFATC3	203
PAX5	201
MAF::NFE2	193
TP63	191
SMAD2::SMAD3::SMAD4	189
Hand1::Tcf3	183
NFKB2	181
BATF3	180
RUNX2	173
Foxj2	173
TCF7L2	171
MAFF	163
XBP1	161
ARNT::HIF1A	158
Nr1h3::Rxra	153
MAFG	151
Bach1::Mafk	147
MAFK	147
NKX3-2	145
Foxo1	140
Tcf7	140
POU5F1B	137
NR4A2	136
HNF4G	135
Ahr::Arnt	130
EGR4	129
HSF1	128
ZNF143	124
Mafb	122
STAT1	118
MYB	114
GMEB2	113
TEAD2	110
Arntl	109
NR3C2	107
Stat5a::Stat5b	104
Arid3a	95
CDX2	93
RARA::RXRA	93
GATA1::TAL1	93
ATF4	88
NFIL3	86
FOXP1	83
Gmeb1	83
PDX1	82
ETV4	82
KLF13	81
SNAI2	79
ZBTB33	79
PRDM1	77
Hic1;	75
MEF2B	70
Pou5f1::Sox2	69
HINFP	65
EGR3	63
Ddit3::Cebpa	63
EOMES	60
BCL6B	59
RXRB	56
SPIB	56
REST	55
NR2C2	54
MYBL2	54
Vdr	51
Gfi1b	50
RXRG	50
Bcl6	48
SREBF1	46
TBX1	43
Rarg	43
CREB3L1	43
FOXH1	42
ELF5	42
TP53	40
FOXP3	38
CLOCK	38
IRF1	38
Nkx3-1	37
SCRT1	37
Dux	36
SREBF2	36
NFATC1	35
MEF2A	35
ZBTB18	35
RFX5	34
GLI2	34
MAFG::NFE2L1	33
SRF	33
Sox17	29
TP73	28
CREB3	26
Rarb	26
NR3C1	23
PPARG	22
Ascl2	21
DUX4	20
POU2F2	20
Mecom	20
BARX1	13
GRHL1	13
PROX1	12
HNF1B	12
TBX19	10
RXRA::VDR	10
MEIS1	10
RFX2	10
Creb3l2	10
LEF1	9
FOS::JUNB	9
Rfx1	8
MEF2D	8
Nr5a2	7
FOXO4	7
Pax6	7
Hes1	7
FOS::JUND	6
Srebf1(var.2)	6
SMAD3	5
RORA(var.2)	5
Id2	5
RARA	4
MIXL1	4
HNF1A	4
HOXA13	4
RORA	4
Arx	3
ATF7	3
E2F8	3
Klf12	3
NFAT5	2
HSF2	2
Pitx1	2
Hoxa11	2
NFIC::TLX1	2
Alx4	2
ISX	2
TBP	2
DBP	2
Nkx2-5-var.2	1
PAX3	1
HES5	1
FOS::JUN(var.2)	1
Sox1	1
IRF2	1
Myod1	1
SREBF2(var.2)	1
NKX2-3	1
HOXA5	1
FOSB::JUN	1
NKX2-8	1

Motif name

Number of overlap

2013

2002

1747

1741

1564