NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_CTCF_SRX1659544	number of peaks	12320
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HELA	Number of reads	37390166
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	6010
MYC	1695
MYCN	1515
Tcf12	1298
SP1	1128
TCF4	1084
ZEB1	973
TAL1::TCF3	894
NFIC	838
TCF3	714
NR2F1	649
E2F4	499
ZBTB7A	498
MYBL1	441
RUNX3	438
TFAP2C	431
TFAP2A-var.2	414
E2F1	410
ZNF740	406
RUNX1	400
TFAP2A	397
STAT3	392
MAX	357
Gabpa	339
Sox2	331
EGR1	328
ELF1	292
ERG	289
MAX::MYC	279
EGR2	277
Esrrg	271
YY1	265
BHLHE41	265
ELK1	249
TFAP4	248
NR1H2::RXRA	246
NEUROD1	238
FOXA1	216
Rxra	214
TFAP2A-var.3	208
Pparg::Rxra	203
Nr1h3::Rxra	200
TEAD4	198
ZNF263	193
Ar	191
NRF1	191
NFKB1	190
THAP1	184
KLF4	182
EBF1	164
E2F6	162
Foxa2	153
USF2	148
Gata1	145
KLF5	141
OTX2	140
PAX5	138
E2F3	136
STAT1::STAT2	135
GATA3	132
TEAD1	130
ETS1	128
Hnf4a	123
USF1	122
Esrra	121
SOX9	120
Tcf21	117
CEBPB	112
KLF9	111
POU5F1B	109
REL	109
BHLHE40	106
SMAD2::SMAD3::SMAD4	105
FOS	101
PBX1	98
NFIA	96
ETV1	95
NFKB2	89
RELA	89
SP4	85
SP3	85
SPI1	85
Gata4	84
CEBPD	84
NKX3-2	84
FOSL2	83
Klf1	83
Arid3a	82
Foxj2	81
TCF7L2	75
GATA2	75
FLI1	75
Pou5f1::Sox2	71
ELF3	70
Atf3	69
RUNX2	68
BATF::JUN	68
Arnt	68
GATA5	67
Hand1::Tcf3	65
CEBPA	65
ELK4	64
FOSL1	64
RARA::RXRA	63
KLF13	60
Tcf7	60
PDX1	58
ETV6	57
STAT1	56
JUND	56
JUN	54
CREB1	51
MAFK	50
ARNT::HIF1A	50
Foxo1	50
TP63	50
EOMES	48
Atf1	48
ETV3	47
HSF1	46
BCL6B	46
TEAD2	45
HNF4G	44
FOS::JUN	43
Mafb	43
TFDP1	41
MYB	41
FOXP1	39
NFATC3	39
Bcl6	38
Stat5a::Stat5b	37
SCRT1	37
ERF	37
ELK3	36
Vdr	35
EGR4	35
HEY1	35
MYBL2	34
SNAI2	34
MAFF	31
GATA1::TAL1	31
CDX2	31
ZNF143	31
MAF::NFE2	29
ZBTB18	29
Ahr::Arnt	29
FEV	29
TP53	29
MEF2B	28
NR3C2	28
Gfi1b	27
SP2	27
Nfe2l2	26
HINFP	24
NR4A2	24
BATF3	24
NFE2	24
TBX1	23
SRF	22
Nkx3-1	22
ATF4	22
Bach1::Mafk	22
EGR3	22
FOXP3	21
REST	21
JUNB	19
MAFG	19
MEF2A	19
NFYB	18
PPARG	17
POU2F2	17
NFIL3	17
Hic1;	17
ELF5	16
Dux	16
SPIB	16
NFYA	16
NFATC1	15
PRDM1	14
RXRB	14
DUX4	12
RXRG	12
IRF1	12
FOXH1	11
GRHL1	9
Arntl	9
Ascl2	9
SREBF2	8
SREBF1	8
Ddit3::Cebpa	8
XBP1	8
GLI2	8
Gmeb1	8
TP73	7
Sox17	7
RFX5	6
Rarg	6
RXRA::VDR	6
Mecom	6
ZBTB33	5
NR2C2	5
TBX19	5
NR3C1	5
Rarb	5
LEF1	5
PROX1	5
MEF2D	4
Srebf1(var.2)	4
RORA(var.2)	4
CREB3L1	3
ETV4	3
HNF1B	3
MEIS1	3
Pitx1	2
Pax6	2
SMAD3	2
RARA	2
CLOCK	2
RORA	2
Alx4	2
Nr5a2	2
GMEB2	2
RFX2	1
FOS::JUND	1
Tcfl5	1
HSF2	1
Creb3l2	1
CREB3	1
MTF1	1
Rfx1	1
NFIC::TLX1	1
NKX2-3	1
HNF1A	1

Motif name

Number of overlap

6010

1695

1515

1298

1128