NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_CTCF_SRX1659543	number of peaks	18991
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HELA	Number of reads	45635905
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	8116
MYC	2196
MYCN	2055
Tcf12	1648
TCF4	1362
SP1	1353
ZEB1	1202
TAL1::TCF3	1122
NFIC	1074
TCF3	876
NR2F1	782
E2F4	607
ZBTB7A	601
RUNX3	576
MYBL1	561
RUNX1	550
STAT3	536
MAX	518
Sox2	516
TFAP2C	514
ZNF740	509
E2F1	499
TFAP2A	490
TFAP2A-var.2	480
Gabpa	452
ERG	409
MAX::MYC	399
EGR1	390
ELF1	382
Esrrg	360
YY1	350
BHLHE41	344
EGR2	340
FOXA1	329
TFAP4	316
ELK1	316
TEAD4	297
NR1H2::RXRA	292
NEUROD1	279
Rxra	278
Pparg::Rxra	269
Ar	256
Nr1h3::Rxra	254
TFAP2A-var.3	242
Gata1	240
NFKB1	239
ZNF263	233
NRF1	230
Foxa2	229
KLF4	224
THAP1	221
GATA3	204
EBF1	202
OTX2	181
USF2	181
E2F6	180
USF1	178
ETS1	173
TEAD1	171
CEBPB	168
E2F3	165
STAT1::STAT2	165
Tcf21	162
Esrra	161
FOS	160
Hnf4a	157
SOX9	157
POU5F1B	156
KLF5	154
PBX1	151
PAX5	151
Gata4	149
BHLHE40	146
Arid3a	142
NFIA	139
REL	135
GATA2	133
SMAD2::SMAD3::SMAD4	125
NKX3-2	122
KLF9	122
ETV1	121
SPI1	119
RELA	117
BATF::JUN	116
FOSL2	113
FLI1	107
ELF3	105
CEBPD	105
SP4	104
Atf3	102
CEBPA	101
TCF7L2	100
Foxj2	95
JUND	94
NFKB2	94
FOSL1	93
Arnt	93
Hand1::Tcf3	92
Tcf7	91
Klf1	89
GATA5	88
RUNX2	85
PDX1	85
Mafb	85
ELK4	82
Pou5f1::Sox2	80
JUN	79
STAT1	78
RARA::RXRA	78
MAFK	78
ARNT::HIF1A	76
SP3	75
CREB1	73
ETV3	72
EOMES	69
FOS::JUN	67
KLF13	65
Atf1	64
ETV6	64
TFDP1	63
BCL6B	63
TEAD2	62
MYB	61
HEY1	61
TP63	59
HSF1	58
Foxo1	57
ELK3	56
MYBL2	53
Vdr	52
NFATC3	50
HNF4G	48
CDX2	48
ERF	48
Bcl6	47
Ahr::Arnt	46
SCRT1	43
Stat5a::Stat5b	43
SNAI2	41
Bach1::Mafk	39
GATA1::TAL1	39
EGR4	38
TP53	38
MAFF	36
BATF3	36
FOXP1	36
Nfe2l2	36
ZBTB18	35
NFE2	35
ZNF143	35
Gfi1b	34
FEV	34
NR3C2	33
NFYB	32
MAF::NFE2	31
HINFP	30
Hic1;	30
Nkx3-1	29
MEF2A	29
SP2	28
MEF2B	28
NR4A2	28
JUNB	28
PPARG	27
TBX1	27
SRF	25
NFIL3	24
REST	23
MAFG	23
PRDM1	23
EGR3	21
Ddit3::Cebpa	21
NFYA	21
IRF1	19
FOXP3	19
RXRB	19
FOXH1	19
POU2F2	18
RXRG	18
ELF5	17
SPIB	16
ATF4	15
GLI2	15
XBP1	13
NFATC1	13
Ascl2	12
NR3C1	11
SREBF2	11
DUX4	11
Arntl	10
SREBF1	10
Dux	10
TP73	9
RFX5	9
Gmeb1	9
GRHL1	9
ZBTB33	9
Mecom	8
Sox17	8
Rarg	7
Tcfl5	7
RXRA::VDR	6
Srebf1(var.2)	6
ETV4	6
HNF1B	6
Rarb	6
Nr5a2	6
MEIS1	6
TBX19	6
NR2C2	5
PROX1	5
GMEB2	5
RORA(var.2)	4
Pax6	3
HSF2	3
RARA	3
Hoxa9	2
SMAD3	2
CREB3L1	2
MIXL1	2
Hes1	2
RORA	2
Creb3l2	2
CLOCK	2
RFX2	2
NKX2-3	1
MEF2D	1
TFE3	1
BARX1	1
CREB3	1
IRF2	1
Pitx1	1
Alx4	1
NFIC::TLX1	1
FOS::JUND	1
LEF1	1
HNF1A	1

Motif name

Number of overlap

8116

2196

2055

1648

1362