NAIK Genome Database

experiment name	hs_CelllinederivedfromB_BJABBcell_undef_TRIM28_SRX2059876	number of peaks	68319
antibody	TRIM28
cell line	BJABBCELL	Number of reads	72685821
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	3550
CTCF	3237
TCF4	3127
SPI1	2961
ERG	2603
MYC	2586
TAL1::TCF3	2576
MYCN	2326
Esrrg	2303
Gabpa	2278
Tcf12	2271
TCF3	2085
ELF1	2074
RUNX1	1769
ZNF740	1636
MAX	1520
E2F1	1489
RUNX3	1446
ETS1	1333
ZBTB7A	1303
MYBL1	1292
NR2F1	1262
STAT1::STAT2	1241
ZEB1	1234
E2F4	1225
ELK1	1202
NFIC	1162
EGR1	1136
ETV6	1134
FOS	1063
TFAP2A	950
STAT3	932
EBF1	931
TFAP2A-var.2	928
BATF::JUN	872
YY1	849
MAX::MYC	824
PBX1	817
BHLHE41	807
ELF3	801
USF2	797
JUND	793
FLI1	791
TFAP4	776
TFAP2C	761
Sox2	747
NFKB1	743
USF1	736
FOSL2	710
EGR2	709
FOXA1	686
FOSL1	650
KLF5	638
JUN	627
Atf3	601
FOS::JUN	600
BHLHE40	597
ETV1	592
NRF1	557
PAX5	555
KLF4	552
Klf1	526
Gata1	524
REL	516
ZNF263	489
ELK4	477
Ar	469
SP3	465
Esrra	464
Rxra	433
TFAP2A-var.3	433
Foxa2	428
NFKB2	422
E2F6	418
NR1H2::RXRA	413
TFDP1	409
ELK3	404
HEY1	398
Pparg::Rxra	397
ERF	393
CEBPB	382
GATA2	378
NEUROD1	370
Tcf21	367
TEAD4	363
GATA3	346
NFE2	341
Nfe2l2	331
MYB	329
Hand1::Tcf3	325
MEF2B	324
KLF9	320
Hnf4a	316
NFATC1	310
ETV3	308
Arnt	306
SP2	303
CREB1	281
RELA	276
OTX2	276
Gata4	273
NFIA	272
SOX9	271
SP4	265
POU2F2	265
SMAD2::SMAD3::SMAD4	263
MAF::NFE2	258
CEBPA	256
ARNT::HIF1A	254
E2F3	253
MAFK	246
POU5F1B	243
THAP1	240
JUNB	229
Bach1::Mafk	228
Atf1	223
MAFF	214
RUNX2	206
Foxo1	203
TEAD1	200
MAFG	198
TP63	196
GATA5	189
TCF7L2	181
CEBPD	177
MEF2A	172
Nr1h3::Rxra	167
Foxj2	165
BCL6B	163
NFYB	163
GATA1::TAL1	161
NFYA	161
Bcl6	158
STAT1	157
SNAI2	155
Pou5f1::Sox2	154
Tcf7	152
Stat5a::Stat5b	147
NFATC3	146
Mafb	143
FEV	132
NKX3-2	127
EGR4	121
IRF1	119
RARA::RXRA	119
REST	113
BATF3	113
EOMES	110
HNF4G	109
HSF1	108
NR3C2	107
XBP1	101
DUX4	101
TBX1	98
Dux	94
MYBL2	93
Arid3a	91
NR4A2	90
ZNF143	90
KLF13	87
PDX1	87
NR3C1	86
TEAD2	85
Arntl	84
RXRB	83
Vdr	83
FOXP1	81
PRDM1	81
Ahr::Arnt	81
SCRT1	80
HINFP	79
SRF	79
ZBTB33	77
CDX2	73
RXRG	72
ATF4	66
MEIS1	65
GMEB2	64
EGR3	62
Gfi1b	60
Hic1;	58
SREBF1	57
MAFG::NFE2L1	53
ETV4	50
NFIL3	49
FOXP3	46
SPIB	46
Ddit3::Cebpa	44
TP53	43
Gmeb1	40
Nkx3-1	37
SREBF2	37
TP73	37
Rarg	36
ZBTB18	35
FOXH1	33
MEF2D	32
ELF5	31
CLOCK	30
NR2C2	28
Sox17	27
Rarb	27
RFX5	23
CREB3L1	22
PPARG	20
HNF1B	19
RXRA::VDR	18
Mecom	18
Pax6	17
GLI2	16
GRHL1	15
LEF1	10
Ascl2	9
CREB3	9
RORA(var.2)	9
Hoxa9	7
TBX19	7
HNF1A	6
NFIC::TLX1	6
MIXL1	6
Creb3l2	5
SMAD3	5
RFX2	4
IRF9	4
Hes1	4
Rfx1	4
FOS::JUND	4
BARX1	4
HSF2	4
Nr5a2	4
Arx	3
Id2	3
Pitx1	3
Klf12	3
E2F8	3
PROX1	3
FOXO4	3
DBP	2
FOS::JUNB	2
RARA	2
RORA	2
NFAT5	1
Stat4	1
SREBF2(var.2)	1
IRF2	1
HOXA5	1
Nkx2-5-var.2	1
NKX2-8	1
PAX3	1
POU3F2	1
TBP	1
HOXA13	1
Srebf1(var.2)	1

Motif name

Number of overlap

3550

3237

3127

2961

2603