NAIK Genome Database

experiment name	hs_breastepithelialcell_MCF10A_undef_BRCA1_SRX182682	number of peaks	16189
antibody	BRCA1
cell line	MCF10A	Number of reads	14599265
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
ELK1	566
ERG	540
Gabpa	469
ELF1	468
SP1	455
ETS1	449
E2F4	445
NRF1	419
MYCN	410
MYC	397
E2F1	388
ELK4	336
ZBTB7A	331
FOS	322
ETV1	293
Esrrg	287
TAL1::TCF3	270
MAX	268
TCF4	248
ERF	247
BATF::JUN	247
Tcf12	245
FOSL2	244
ZNF740	242
CTCF	238
FOSL1	234
NR2F1	232
MYBL1	230
STAT3	229
TCF3	226
JUND	223
ELK3	223
EGR1	218
ETV3	216
YY1	206
JUN	205
TFDP1	203
NFIC	198
FOS::JUN	196
Atf3	192
EGR2	190
ZEB1	178
ETV6	178
KLF5	173
MAX::MYC	170
PBX1	164
TFAP2C	156
TFAP2A	153
BHLHE40	150
TFAP2A-var.2	150
KLF4	150
RUNX1	149
USF2	142
CEBPB	133
ELF3	128
FLI1	121
USF1	121
HEY1	120
E2F6	119
Atf1	115
Ar	114
Sox2	114
BHLHE41	111
FOXA1	109
SOX9	108
Esrra	107
TEAD4	105
ZNF263	102
Tcf21	101
SP3	99
CEBPA	99
CREB1	95
TP63	93
STAT1::STAT2	91
NFATC3	88
FEV	87
Klf1	86
E2F3	85
NR1H2::RXRA	82
Rxra	82
RUNX3	81
SPI1	81
TEAD1	81
TFAP4	81
Pparg::Rxra	79
THAP1	78
NFKB1	76
CEBPD	74
RELA	73
SP2	72
Foxa2	72
JUNB	71
NFE2	70
PAX5	69
KLF9	68
REL	66
EBF1	65
POU5F1B	65
Hnf4a	65
Arnt	64
SP4	62
NFYB	61
Gata1	59
TFAP2A-var.3	59
GATA3	57
Nfe2l2	57
XBP1	56
NR4A2	54
NEUROD1	54
GMEB2	52
NFYA	50
SMAD2::SMAD3::SMAD4	49
MAF::NFE2	48
MYB	48
Hand1::Tcf3	47
Foxj2	47
NFKB2	46
ARNT::HIF1A	45
RUNX2	43
Gata4	43
NKX3-2	42
STAT1	42
GATA2	41
NFIA	41
BATF3	41
ETV4	39
EGR4	37
NR3C2	37
MAFF	37
GATA5	36
Foxo1	35
Bach1::Mafk	34
OTX2	33
TCF7L2	33
Ahr::Arnt	33
Tcf7	32
HSF1	31
MAFK	31
Stat5a::Stat5b	30
Gmeb1	29
Nr1h3::Rxra	28
HNF4G	28
MAFG	28
Arntl	28
ATF4	27
CDX2	26
KLF13	25
TEAD2	25
Mafb	24
CREB3L1	24
ZNF143	23
MEF2B	23
FOXP1	23
ZBTB33	22
HINFP	22
NFIL3	21
GATA1::TAL1	20
RARA::RXRA	20
EGR3	20
ELF5	20
SNAI2	20
NFATC1	17
Pou5f1::Sox2	17
RXRB	17
Arid3a	16
NR2C2	16
PDX1	16
RXRG	16
SREBF2	15
TP73	15
CLOCK	15
SREBF1	14
Vdr	14
EOMES	14
Hic1;	14
REST	14
Ddit3::Cebpa	13
TP53	13
PRDM1	13
SPIB	12
NR3C1	11
FOXH1	11
IRF1	10
Rarg	10
MYBL2	10
TBX1	10
CREB3	9
FOXP3	9
Dux	9
MEF2A	9
Nkx3-1	8
GLI2	8
POU2F2	8
ZBTB18	8
Gfi1b	7
Rarb	6
Bcl6	5
BCL6B	5
Sox17	5
Creb3l2	5
Mecom	5
MAFG::NFE2L1	5
Ascl2	5
SRF	4
MEIS1	4
FOXO4	4
RFX5	4
HNF1B	4
SCRT1	4
LEF1	3
RORA(var.2)	3
Pax6	3
DUX4	3
Hes1	3
BARX1	3
TBX19	3
RXRA::VDR	3
GRHL1	2
PROX1	2
HNF1A	2
NFAT5	2
IRF2	2
Arx	1
Stat4	1
Nr5a2	1
SOX4	1
RARA	1
FOSB::JUN	1
RORA	1
RFX2	1
DBP	1
Rfx1	1
TBP	1
PPARG	1
NFIC::TLX1	1
FOS::JUN(var.2)	1
HES5	1
HOXA5	1
Id2	1
HOXA13	1
NEUROD2	1

Motif name

Number of overlap

566

540

469

468

455