experiment name
hs_BreastCancer_MDAMB231_cancer_MBD3_SRX1489434
number of peaks
52646
antibody
MBD3
cell line
MDAMB231
Number of reads
63980016
sra ftp link
link
SRX search
link
homer denovo motifs
link
Genome view
link
Overlapping motifs:
Motif name
Number of overlap
FOS
5696
BATF::JUN
5158
FOSL2
4425
JUN
4314
FOSL1
4235
JUND
4084
FOS::JUN
3966
Atf3
3093
PBX1
3063
SP1
2313
CTCF
2122
ERG
2068
Gabpa
1848
MYC
1758
MYCN
1741
ELF1
1685
NFIC
1657
RUNX1
1568
NR2F1
1541
Esrrg
1509
Tcf12
1417
TEAD4
1366
ELK1
1255
E2F1
1216
E2F4
1211
TEAD1
1192
STAT3
1175
TAL1::TCF3
1132
ETS1
1128
JUNB
1122
MAX
1115
FOXA1
1047
NFE2
1016
RUNX3
975
ZBTB7A
962
TCF4
958
Sox2
930
Nfe2l2
923
TCF3
918
Foxa2
869
MYBL1
844
TFAP2A
839
TFAP2C
830
KLF5
816
ZNF740
793
KLF4
778
EGR1
770
ETV1
725
ELF3
720
EGR2
705
Esrra
701
GATA3
685
MAF::NFE2
651
SOX9
642
FLI1
642
MAFF
631
USF2
630
MAX::MYC
628
ELK4
624
MAFG
621
USF1
592
ZEB1
580
TFAP2A-var.2
580
Ar
575
NRF1
565
Gata1
562
Tcf21
561
NR1H2::RXRA
554
BHLHE40
542
NFYB
536
NFYA
527
Klf1
514
ETV6
507
RUNX2
496
GATA2
489
Rxra
484
Pparg::Rxra
481
ERF
476
NFKB1
472
MAFK
465
SPI1
463
ETV3
461
Gata4
458
STAT1::STAT2
456
ELK3
453
CREB1
453
CEBPB
436
Hnf4a
432
Bach1::Mafk
431
SP2
430
SP3
414
TP63
409
TFAP4
404
YY1
402
GATA5
379
PAX5
368
TFDP1
365
Atf1
356
RELA
349
REL
346
E2F6
322
NFIA
315
ZNF263
315
KLF9
314
Arnt
309
BHLHE41
307
SP4
290
HEY1
288
EBF1
286
TCF7L2
284
CEBPA
281
ARNT::HIF1A
260
Foxj2
257
Nr1h3::Rxra
255
Foxo1
244
TFAP2A-var.3
241
CEBPD
240
POU5F1B
236
SMAD2::SMAD3::SMAD4
230
Tcf7
225
NFKB2
225
E2F3
219
OTX2
218
BATF3
217
NR3C2
213
NEUROD1
208
Mafb
191
THAP1
189
Hand1::Tcf3
179
XBP1
178
Pou5f1::Sox2
175
CDX2
174
NKX3-2
168
TEAD2
167
Arid3a
166
HSF1
160
STAT1
160
GATA1::TAL1
160
MEF2B
159
MYBL2
158
RARA::RXRA
157
Stat5a::Stat5b
152
PDX1
143
MYB
138
FOXP1
136
ETV4
132
HNF4G
126
Ahr::Arnt
124
MAFG::NFE2L1
118
PRDM1
115
ATF4
111
MEF2A
110
NFATC3
109
EGR4
107
FEV
103
Arntl
99
GMEB2
97
ZNF143
92
EOMES
89
Gfi1b
89
NR4A2
89
NFATC1
88
Dux
88
TP53
85
RXRB
85
NFIL3
83
IRF1
79
Vdr
77
Nkx3-1
75
TP73
74
SRF
72
KLF13
72
TBX1
71
RXRG
71
Hic1;
70
Ddit3::Cebpa
69
BCL6B
69
POU2F2
62
Bcl6
61
HNF1B
58
Gmeb1
57
HINFP
54
DUX4
53
SCRT1
52
RFX5
51
EGR3
50
SREBF1
49
ZBTB33
48
Rarg
45
FOXP3
45
FOXH1
43
Sox17
41
SNAI2
40
NR2C2
39
REST
39
SREBF2
39
NR3C1
38
Rarb
36
MEIS1
36
ELF5
33
CLOCK
33
SPIB
32
ZBTB18
31
PPARG
24
Mecom
24
FOS::JUND
23
FOS::JUNB
22
CREB3L1
22
CREB3
21
GRHL1
20
GLI2
18
LEF1
18
MEF2D
17
RXRA::VDR
16
Ascl2
13
TBX19
11
BARX1
11
PROX1
10
SMAD3
9
Rfx1
9
RFX2
8
HNF1A
8
Pax6
8
RORA(var.2)
7
Hes1
7
MIXL1
7
NFIC::TLX1
7
Creb3l2
7
Nr5a2
6
RARA
6
Srebf1(var.2)
6
POU3F2
5
Id2
5
Klf12
5
RORA
4
FOXO4
4
Hoxa9
3
Alx4
3
Arx
3
Hoxa11
2
Myod1
2
TBP
2
NFAT5
2
Pitx1
2
HOXA13
2
PAX3
2
FOS::JUN(var.2)
2
DBP
2
NKX2-3
2
Nkx2-5-var.2
1
TFE3
1
FOSB::JUN
1
IRF9
1
Stat4
1
HES5
1
SOX4
1
Tcfl5
1
HSF2
1
HOXA5
1
ISL2
1
IRF2
1