NAIK Genome Database

experiment name	hs_BreastCancer_MDA231_cancer_MBD3_SRX246862	number of peaks	11180
antibody	MBD3
cell line	MDA231	Number of reads	33223313
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOS	2501
BATF::JUN	2070
FOSL2	1883
FOSL1	1864
JUND	1744
JUN	1660
FOS::JUN	1604
Atf3	1319
PBX1	1193
NR2F1	1129
TEAD4	797
FOXA1	773
TEAD1	752
ERG	688
RUNX1	665
Foxa2	665
Gabpa	564
Esrra	564
GATA3	542
Esrrg	537
NFIC	504
JUNB	487
SP1	482
ELF1	472
Sox2	457
MYC	449
NFE2	447
GATA2	424
Gata4	420
Tcf12	405
Nfe2l2	402
MYCN	397
STAT3	391
Gata1	369
Rxra	348
Pparg::Rxra	344
Hnf4a	342
TAL1::TCF3	341
NR1H2::RXRA	332
GATA5	326
MAX	325
ELF3	301
TCF3	298
TFAP2A	296
KLF4	287
TCF4	271
MAF::NFE2	267
RUNX3	266
MAFF	260
Ar	260
ZBTB7A	258
ETS1	243
FLI1	236
MYBL1	230
RUNX2	225
CEBPB	224
MAFG	223
TFAP2C	220
Tcf21	215
SPI1	212
ZNF740	195
EGR1	191
ZEB1	190
MAFK	189
TP63	185
MAX::MYC	182
ELK1	181
NFKB1	181
TCF7L2	176
Bach1::Mafk	168
Tcf7	159
EGR2	154
SOX9	153
ETV6	146
CTCF	144
USF1	144
ETV1	143
TFAP2A-var.2	143
KLF5	141
Foxj2	138
E2F4	136
USF2	132
Foxo1	128
RELA	126
REL	125
EBF1	124
CREB1	122
E2F1	121
CEBPA	121
CDX2	119
GATA1::TAL1	116
Nr1h3::Rxra	116
TFAP4	113
RARA::RXRA	112
POU5F1B	111
YY1	105
BHLHE40	102
MYBL2	102
NFIA	101
NR3C2	98
PAX5	94
HSF1	93
Mafb	91
ERF	91
SMAD2::SMAD3::SMAD4	89
BHLHE41	89
OTX2	87
STAT1::STAT2	86
ELK4	82
ETV4	82
KLF9	81
HNF4G	81
NFKB2	80
FOXP1	78
CEBPD	76
HEY1	75
ZNF263	72
E2F6	72
MEF2B	72
Pou5f1::Sox2	71
RXRB	69
Arnt	65
RXRG	65
NRF1	65
TFAP2A-var.3	64
ETV3	64
BATF3	59
NKX3-2	59
TEAD2	59
MAFG::NFE2L1	55
NR2C2	54
Atf1	54
Hand1::Tcf3	51
ELK3	51
ARNT::HIF1A	50
MEF2A	49
SP3	49
Klf1	48
PRDM1	48
PDX1	43
Stat5a::Stat5b	42
MYB	42
Ahr::Arnt	42
Nkx3-1	42
HNF1B	41
TP73	41
EOMES	40
Arid3a	39
NEUROD1	38
NFIL3	37
TP53	34
NFATC1	34
NR4A2	33
Vdr	33
TFDP1	32
ATF4	30
Sox17	27
SRF	27
Gfi1b	25
FEV	24
IRF1	23
THAP1	22
ZNF143	22
SPIB	22
STAT1	21
SCRT1	21
EGR4	20
NFATC3	20
Mecom	20
FOS::JUND	19
BCL6B	19
Dux	19
Ddit3::Cebpa	18
TBX1	18
Bcl6	17
RXRA::VDR	17
NR3C1	17
MEIS1	17
NFYB	16
REST	16
SNAI2	15
DUX4	15
XBP1	14
FOS::JUNB	12
EGR3	12
FOXH1	12
POU2F2	12
NFYA	12
Hic1;	12
FOXP3	11
RFX5	11
PPARG	10
MEF2D	10
Arntl	9
HINFP	9
E2F3	9
TBX19	8
GRHL1	8
ZBTB18	8
RORA(var.2)	8
Rarg	7
Gmeb1	7
LEF1	7
SP2	6
SREBF2	6
Srebf1(var.2)	6
SREBF1	6
HNF1A	6
RARA	6
SP4	6
BARX1	6
GMEB2	5
HSF2	5
Rarb	5
SMAD3	5
ELF5	5
CREB3L1	5
FOXO4	4
Nr5a2	4
CREB3	3
ZBTB33	3
Tcfl5	3
Pitx1	2
FOS::JUN(var.2)	2
RORA	2
Arx	2
Alx4	2
NFIC::TLX1	2
TFE3	2
HOXA13	2
Ascl2	2
Hoxa9	2
Creb3l2	2
GLI2	2
HOXA5	1
RFX2	1
Rfx1	1
Klf12	1
NFAT5	1
HES5	1
FOSB::JUN	1
NKX2-3	1
SOX4	1
PAX3	1
PROX1	1
Pax6	1
CLOCK	1
HOXB13	1
KLF13	1

Motif name

Number of overlap

2501

2070

1883

1864

1744