NAIK Genome Database

experiment name	hs_BreastCancer_HCC2157_cancer_JARID1B_SRX265432	number of peaks	185380
antibody	JARID1B
cell line	HCC2157	Number of reads	76402170
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	16526
MYC	7842
SP1	7562
MYCN	7384
ERG	6165
TFAP2C	5534
TFAP2A	5361
Tcf12	5128
NFIC	4941
Gabpa	4740
ZNF740	4688
ELF1	4627
TCF4	4530
Esrrg	4460
E2F1	4299
MAX	4174
TAL1::TCF3	4096
TFAP2A-var.2	3814
E2F4	3741
NR2F1	3546
ELK1	3304
ZEB1	3203
TCF3	3203
EGR1	3194
Sox2	3065
ZBTB7A	3018
STAT3	2987
EGR2	2818
FOS	2811
ETS1	2605
TEAD4	2505
MAX::MYC	2503
MYBL1	2472
FOXA1	2390
RUNX1	2312
CEBPB	2192
NRF1	2157
FOSL2	2054
Ar	1981
YY1	1970
JUND	1961
ELF3	1868
ZNF263	1844
SPI1	1829
KLF5	1810
BATF::JUN	1772
FLI1	1770
ETV1	1769
BHLHE41	1760
USF1	1707
FOSL1	1705
RUNX3	1594
USF2	1586
KLF4	1571
TEAD1	1544
JUN	1522
BHLHE40	1498
Foxa2	1494
Esrra	1453
PBX1	1448
FOS::JUN	1433
ELK4	1413
TFAP2A-var.3	1412
E2F6	1406
Atf3	1402
CEBPA	1349
ERF	1307
TFAP4	1210
NR1H2::RXRA	1210
NFKB1	1177
ETV6	1157
ELK3	1146
Pparg::Rxra	1136
Rxra	1134
NEUROD1	1083
EBF1	1071
SOX9	1049
Tcf21	1047
STAT1::STAT2	1038
NFIA	1030
TFDP1	1021
ETV3	1017
Hnf4a	1004
CREB1	942
CEBPD	919
HEY1	898
GATA3	883
SP3	882
OTX2	872
Atf1	864
TP63	813
RELA	803
REL	802
Arnt	796
Gata1	795
E2F3	793
Klf1	788
SP4	781
PAX5	770
THAP1	754
KLF9	733
SMAD2::SMAD3::SMAD4	698
NKX3-2	670
SP2	659
POU5F1B	633
ARNT::HIF1A	627
Gata4	619
GATA2	598
NFE2	584
Nfe2l2	564
Nr1h3::Rxra	557
NFKB2	534
TCF7L2	527
MAFK	512
Foxj2	502
MAF::NFE2	498
BATF3	497
EGR4	493
NFYB	484
NR3C2	467
Mafb	462
Hand1::Tcf3	457
Tcf7	450
NFYA	445
MAFF	439
RUNX2	439
XBP1	435
JUNB	432
GATA5	419
Arid3a	406
Bach1::Mafk	401
Pou5f1::Sox2	390
HNF4G	365
NFATC3	362
GRHL1	359
Foxo1	356
MYB	352
Ahr::Arnt	351
CDX2	346
RFX5	346
MAFG	343
STAT1	339
HSF1	334
ZNF143	332
RARA::RXRA	324
PDX1	316
ATF4	305
SNAI2	298
EOMES	281
FEV	279
FOXP1	257
GMEB2	253
Stat5a::Stat5b	249
EGR3	248
MEF2B	246
GATA1::TAL1	240
MYBL2	229
REST	224
TEAD2	217
Ddit3::Cebpa	217
BCL6B	216
Nkx3-1	205
HINFP	202
NFIL3	197
Arntl	191
Vdr	187
TP53	180
NR4A2	179
SCRT1	179
KLF13	176
PRDM1	171
Bcl6	169
ETV4	166
MEF2A	161
ZBTB33	147
Hic1;	138
FOXH1	136
ELF5	132
Dux	132
NFATC1	131
IRF1	130
SRF	123
Gmeb1	118
RXRB	118
TBX1	113
RXRG	113
Gfi1b	109
Sox17	107
SREBF2	106
POU2F2	100
RFX2	95
NR3C1	95
DUX4	93
FOXP3	93
SREBF1	92
TP73	89
MAFG::NFE2L1	88
SPIB	88
ZBTB18	84
CLOCK	77
NR2C2	73
HNF1B	63
CREB3L1	61
Rarg	56
Rarb	53
MEIS1	52
PPARG	52
Rfx1	48
GLI2	46
Pax6	40
Ascl2	39
Nr5a2	39
CREB3	37
RXRA::VDR	35
MEF2D	33
TBX19	29
Mecom	24
PROX1	22
Srebf1(var.2)	22
Hes1	20
LEF1	20
FOS::JUNB	16
FOS::JUND	16
RORA(var.2)	15
BARX1	15
Creb3l2	15
SMAD3	13
RARA	13
MIXL1	11
Id2	10
HNF1A	10
Hoxa9	8
Klf12	7
E2F8	7
NFIC::TLX1	7
RORA	7
HSF2	6
IRF2	5
ATF7	4
ISX	4
HOXA13	4
Arx	4
Tcfl5	4
Alx4	3
NFAT5	3
POU3F2	3
FOXO4	2
DBP	2
TFE3	2
Sox1	2
Hoxa11	2
HES5	2
HOXA5	2
SREBF2(var.2)	1
FOSB::JUN	1
FOS::JUN(var.2)	1
Nkx2-5-var.2	1
TFEB	1
TBP	1
Myod1	1
Pitx1	1
E2F2	1
NKX2-3	1

Motif name

Number of overlap

16526

7842

7562

7384

6165