NAIK Genome Database

experiment name	hs_BreastAdenocarcinoma_MDAMB231_undef_LEO1_SRX441368	number of peaks	50286
antibody	LEO1
cell line	MDAMB231	Number of reads	28813997
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	2796
MYCN	2490
MYC	2466
SP1	1819
TCF4	1435
TAL1::TCF3	1406
Tcf12	1348
MAX	1287
E2F1	1261
TCF3	1093
NR2F1	987
EGR1	952
ZEB1	940
MAX::MYC	893
TFAP2C	868
TFAP2A-var.2	858
ZNF740	853
E2F4	823
ZBTB7A	813
TFAP2A	798
EGR2	791
NFIC	761
ERG	737
NRF1	651
Gabpa	635
ELF1	611
Esrrg	592
BHLHE41	573
YY1	527
RUNX1	522
KLF4	477
ZNF263	470
ELK1	456
MYBL1	428
E2F6	417
FOS	398
KLF5	395
STAT3	385
ETS1	384
BHLHE40	381
Esrra	369
NFKB1	358
HEY1	356
Ar	354
USF1	352
TFAP2A-var.3	347
Sox2	340
USF2	328
RUNX3	328
NEUROD1	295
EBF1	294
FOSL2	284
TFDP1	283
JUND	281
TEAD4	280
KLF9	271
Tcf21	267
THAP1	265
TFAP4	265
BATF::JUN	262
ETV1	260
NR1H2::RXRA	257
Hnf4a	255
Pparg::Rxra	254
Klf1	252
PAX5	246
REST	246
FLI1	242
FOXA1	240
Rxra	240
FOSL1	237
Arnt	228
PBX1	226
JUN	223
Gata1	221
FOS::JUN	212
Atf3	211
SP3	209
E2F3	198
CEBPB	195
SPI1	193
TEAD1	192
REL	186
ELK3	185
SOX9	184
ELK4	183
SMAD2::SMAD3::SMAD4	180
Foxa2	170
POU5F1B	168
CREB1	161
ARNT::HIF1A	158
ETV6	156
STAT1::STAT2	156
NFIA	153
SNAI2	151
NFKB2	149
TP63	144
Hand1::Tcf3	143
Atf1	143
ELF3	143
ETV3	141
EGR4	140
OTX2	140
RELA	138
SP4	138
GATA3	137
ERF	137
Nr1h3::Rxra	126
CEBPA	125
Gata4	124
GATA2	119
CEBPD	114
Ahr::Arnt	107
RUNX2	103
NFATC3	99
HNF4G	96
FEV	90
TCF7L2	90
RARA::RXRA	87
SP2	86
GATA5	85
NR3C2	84
NFE2	81
Nfe2l2	79
MAFK	78
Tcf7	78
MYB	77
Bach1::Mafk	75
GATA1::TAL1	75
EGR3	75
JUNB	69
NR4A2	68
XBP1	67
NFYB	66
MAF::NFE2	65
KLF13	64
HINFP	63
STAT1	61
Mafb	61
Foxj2	60
BATF3	57
Hic1;	54
MAFF	53
GMEB2	53
Pou5f1::Sox2	52
NFYA	52
NKX3-2	50
ZNF143	50
HSF1	49
MAFG	47
Gmeb1	47
EOMES	46
SCRT1	44
TEAD2	44
Foxo1	40
BCL6B	40
TP53	39
PDX1	39
SPIB	38
Stat5a::Stat5b	38
Bcl6	37
Arntl	34
CREB3L1	32
Ddit3::Cebpa	31
ATF4	31
FOXH1	30
NR2C2	30
Vdr	29
ETV4	28
FOXP1	28
GLI2	27
Dux	25
ZBTB18	25
ZBTB33	23
IRF1	23
RXRG	22
RXRB	22
TBX1	22
Gfi1b	21
PRDM1	21
NFIL3	21
Arid3a	21
TP73	20
SRF	20
CDX2	20
Rarg	19
Ascl2	19
CLOCK	19
ELF5	19
MYBL2	18
POU2F2	17
Rarb	16
MEF2B	15
SREBF2	15
RFX5	14
NFATC1	14
SREBF1	13
PPARG	13
NR3C1	13
FOXP3	11
Nkx3-1	11
LEF1	11
RXRA::VDR	11
DUX4	11
Sox17	9
MEF2A	8
GRHL1	8
MAFG::NFE2L1	8
Nr5a2	8
Id2	7
CREB3	7
Creb3l2	6
PROX1	5
Hes1	5
RFX2	4
Mecom	4
RARA	3
MEIS1	3
Srebf1(var.2)	3
TBX19	3
Pax6	3
MIXL1	2
SMAD3	2
BARX1	2
SREBF2(var.2)	1
Klf12	1
Nr2f6	1
Hoxa9	1
Alx4	1
DBP	1
NFAT5	1
MEF2D	1
HOXA13	1
Znf423	1
NFIC::TLX1	1
FOS::JUNB	1
ESR1	1
Nkx2-5-var.2	1
Tcfl5	1
RORA	1
FOXO4	1
Rfx1	1
HNF1B	1
FOS::JUND	1
NKX2-3	1
TFE3	1
ISX	1
HSF2	1

Motif name

Number of overlap

2796

2490

2466

1819

1435