NAIK Genome Database

experiment name	hs_VillousMesenchymalFibroblast_HVMF_normal_CTCF_SRX199858	number of peaks	42798
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	HVMF	Number of reads	14058810
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	13581
MYC	3019
MYCN	2757
Tcf12	2321
SP1	1974
TCF4	1879
NFIC	1635
ZEB1	1580
TAL1::TCF3	1565
TCF3	1239
NR2F1	1210
ZBTB7A	1030
MYBL1	1005
RUNX3	988
RUNX1	929
Sox2	921
STAT3	852
Gabpa	792
E2F4	786
ZNF740	777
ELF1	688
MAX	685
TFAP2C	680
ERG	669
TFAP2A-var.2	654
TFAP2A	619
E2F1	613
YY1	598
Esrrg	591
FOXA1	571
EGR1	542
MAX::MYC	535
TEAD4	519
NR1H2::RXRA	510
TFAP4	507
ELK1	477
EGR2	468
Pparg::Rxra	432
Arid3a	429
NEUROD1	425
Rxra	424
Foxa2	403
Nr1h3::Rxra	379
NFKB1	375
Gata1	366
TFAP2A-var.3	353
BHLHE41	351
ZNF263	342
KLF4	338
GATA3	337
EBF1	336
Ar	309
OTX2	305
ETS1	302
USF2	300
TEAD1	299
FOS	293
THAP1	282
CEBPB	280
USF1	271
E2F6	270
STAT1::STAT2	266
NRF1	259
PBX1	257
Hnf4a	254
Tcf21	247
SOX9	234
PAX5	232
Esrra	226
BHLHE40	223
Gata4	216
KLF5	215
NFIA	215
FOSL2	212
SPI1	210
ELF3	209
E2F3	208
NKX3-2	206
REL	202
GATA2	202
BATF::JUN	198
ETV1	195
SMAD2::SMAD3::SMAD4	192
POU5F1B	188
Atf3	179
Foxj2	179
RELA	176
TCF7L2	174
JUND	173
NFKB2	162
FOSL1	160
FLI1	157
PDX1	155
CEBPD	153
SP4	151
MAFK	150
Tcf7	148
GATA5	145
Arnt	142
CEBPA	139
JUN	136
Pou5f1::Sox2	134
ELK4	128
Foxo1	128
KLF9	127
STAT1	126
EOMES	123
Hand1::Tcf3	123
FOS::JUN	120
RUNX2	118
ARNT::HIF1A	118
Klf1	117
Mafb	116
CREB1	114
TEAD2	114
BCL6B	107
RARA::RXRA	106
HNF4G	105
HSF1	104
Atf1	101
CDX2	99
ETV6	99
ETV3	96
MYBL2	94
SP3	93
TP63	92
ELK3	88
Vdr	88
MAFF	87
KLF13	85
HEY1	85
Bach1::Mafk	82
Stat5a::Stat5b	81
MYB	76
FOXP1	75
NFE2	75
Bcl6	75
TFDP1	74
ERF	73
Nfe2l2	73
MAF::NFE2	70
MEF2B	67
TP53	66
Gfi1b	66
GATA1::TAL1	65
SCRT1	61
MEF2A	60
MAFG	58
SP2	57
ZBTB18	55
EGR4	54
FEV	50
Nkx3-1	50
IRF1	49
ZNF143	49
SRF	48
Ahr::Arnt	48
BATF3	47
NFATC3	46
NR3C2	46
TBX1	45
JUNB	44
NR4A2	42
PRDM1	40
Hic1;	39
NFYB	37
FOXP3	36
SNAI2	36
REST	36
PPARG	35
NFYA	35
NFIL3	33
HINFP	33
POU2F2	32
ATF4	27
EGR3	27
SPIB	27
ELF5	26
Ddit3::Cebpa	26
RFX5	25
FOXH1	24
NFATC1	24
SREBF2	21
Ascl2	20
XBP1	20
Dux	19
Arntl	18
SREBF1	18
RXRB	17
NR3C1	17
RXRG	16
DUX4	15
GRHL1	15
Sox17	15
NR2C2	14
TP73	14
RXRA::VDR	14
Gmeb1	13
Mecom	12
Rarg	11
MEIS1	11
GLI2	11
Rarb	8
HNF1B	8
PROX1	8
RORA(var.2)	7
CREB3L1	7
ETV4	7
Nr5a2	7
MEF2D	7
RARA	6
TBX19	6
Srebf1(var.2)	6
MAFG::NFE2L1	5
ZBTB33	5
CLOCK	4
Pax6	4
GMEB2	4
LEF1	4
SMAD3	2
MIXL1	2
Hoxa9	2
FOS::JUND	2
Creb3l2	2
RORA	2
TFE3	2
IRF9	1
PAX3	1
CREB3	1
Alx4	1
Hes1	1
FOS::JUNB	1
E2F2	1
Pitx1	1
BARX1	1
E2F8	1
HES5	1
NKX2-8	1
HSF2	1
RFX2	1
NFIC::TLX1	1
HNF1A	1

Motif name

Number of overlap

13581

3019

2757

2321

1974