NAIK Genome Database

experiment name	hs_undifferentiatedembr_undifferentiatedembr_undef_CTCF_SRX1430078	number of peaks	32874
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	UNDIFFERENTIATEDEMBR	Number of reads	27129140
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
CTCF	9461
MYC	2277
MYCN	2055
Tcf12	1719
SP1	1565
TCF4	1413
ZEB1	1279
TAL1::TCF3	1175
NFIC	1048
TCF3	904
NR2F1	894
ZBTB7A	811
E2F4	643
ZNF740	630
Sox2	619
TFAP2C	597
TFAP2A-var.2	587
MYBL1	585
RUNX1	565
Gabpa	553
TFAP2A	548
RUNX3	542
STAT3	537
MAX	526
ELF1	522
E2F1	475
EGR1	465
ERG	451
Esrrg	406
MAX::MYC	401
YY1	387
ELK1	382
NR1H2::RXRA	367
EGR2	352
TFAP4	349
FOXA1	338
TEAD4	322
BHLHE41	321
NEUROD1	319
Rxra	313
TFAP2A-var.3	308
Pparg::Rxra	295
ZNF263	295
NFKB1	273
Nr1h3::Rxra	267
KLF4	256
Foxa2	245
OTX2	239
E2F6	236
EBF1	235
THAP1	233
NRF1	229
USF1	217
Gata1	212
USF2	208
ETS1	205
Ar	198
GATA3	194
E2F3	188
BHLHE40	179
Hnf4a	178
PAX5	173
TEAD1	172
FOS	170
STAT1::STAT2	169
NFIA	165
CEBPB	162
Tcf21	156
Arid3a	156
KLF5	155
REL	152
SMAD2::SMAD3::SMAD4	151
ETV1	148
Esrra	147
SOX9	145
PBX1	145
Gata4	140
GATA2	136
FOSL2	135
POU5F1B	133
RELA	129
NKX3-2	129
SP4	125
ELF3	123
SPI1	123
BATF::JUN	117
FLI1	117
NFKB2	115
KLF9	113
CEBPD	113
JUND	112
Atf3	112
FOSL1	109
CEBPA	104
ELK4	102
Klf1	102
Foxj2	98
GATA5	98
TCF7L2	96
Arnt	95
Hand1::Tcf3	94
EOMES	93
CREB1	92
ETV3	92
JUN	91
Pou5f1::Sox2	84
PDX1	82
Tcf7	80
STAT1	79
HSF1	78
ARNT::HIF1A	76
RUNX2	74
RARA::RXRA	72
FOS::JUN	72
BCL6B	70
ETV6	70
SP3	70
HNF4G	70
HEY1	69
TEAD2	68
MAFK	68
KLF13	67
Atf1	66
TFDP1	61
ELK3	61
TP63	60
Foxo1	60
SNAI2	60
Vdr	57
ZNF143	57
NFATC3	56
FOXP1	56
MYB	55
Mafb	55
Bcl6	50
SCRT1	49
Bach1::Mafk	48
MYBL2	48
MAFF	48
Stat5a::Stat5b	47
ERF	45
SP2	45
GATA1::TAL1	42
Gfi1b	41
TP53	41
CDX2	40
Nfe2l2	40
Ahr::Arnt	40
EGR4	39
NFE2	39
ZBTB18	38
MEF2B	38
REST	38
MAFG	37
MAF::NFE2	37
BATF3	34
Nkx3-1	34
FEV	33
NR3C2	32
Hic1;	32
JUNB	32
NR4A2	31
SRF	31
PRDM1	28
IRF1	28
NFYA	27
NFYB	26
ATF4	26
MEF2A	26
HINFP	25
FOXH1	24
SPIB	23
NFIL3	23
POU2F2	22
PPARG	22
TBX1	20
EGR3	20
ELF5	18
NFATC1	17
Ascl2	17
Ddit3::Cebpa	16
RXRB	16
GRHL1	16
Dux	16
FOXP3	14
RXRG	14
SREBF2	13
Arntl	12
XBP1	12
RFX5	11
NR3C1	11
GLI2	11
NR2C2	10
RXRA::VDR	10
DUX4	10
Gmeb1	9
Rarg	9
SREBF1	8
Rarb	7
Sox17	7
ZBTB33	6
Mecom	6
TP73	6
MEIS1	6
Nr5a2	5
ETV4	5
MEF2D	5
CLOCK	5
MAFG::NFE2L1	5
PROX1	5
Srebf1(var.2)	4
HNF1B	4
RORA(var.2)	3
SMAD3	3
Hes1	3
Pax6	3
LEF1	2
GMEB2	2
Hoxa9	2
Pitx1	2
TBX19	2
BARX1	2
NFIC::TLX1	1
Arx	1
FOS::JUN(var.2)	1
RARA	1
CREB3	1
CREB3L1	1
RORA	1
Creb3l2	1
FOS::JUND	1
FOSB::JUN	1

Motif name

Number of overlap

9461

2277

2055

1719

1565