NAIK Genome Database

experiment name	hs_BreastAdenocarcinoma_MDAMB231_undef_BRG1_SRX1156539	number of peaks	59318
antibody	BRG1
cell line	MDAMB231	Number of reads	29828076
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
GATA3	2500
FOS	1812
Gata4	1405
Gata1	1337
GATA2	1333
JUND	1244
BATF::JUN	1210
FOSL2	1190
MYCN	1093
MYC	1089
FOXA1	1087
NR2F1	1056
JUN	990
FOS::JUN	989
FOSL1	939
GATA5	924
TFAP2A	914
ERG	912
TAL1::TCF3	887
PBX1	836
SP1	836
MAX	802
TFAP2A-var.2	799
Tcf12	782
Sox2	760
RUNX1	744
Esrrg	739
TCF3	723
TCF4	703
Atf3	661
E2F1	651
Foxa2	648
ZBTB7A	628
ZNF740	613
EGR1	607
CEBPB	605
Ar	597
Gabpa	581
ZEB1	546
NFIC	541
ELF1	540
TFAP2C	530
CTCF	523
Esrra	515
TEAD4	507
TEAD1	466
MAX::MYC	457
STAT3	432
MYBL1	431
Hnf4a	422
NFKB1	410
KLF4	372
SPI1	346
YY1	335
JUNB	331
GATA1::TAL1	330
ELF3	321
EBF1	316
NFE2	307
E2F4	306
TFAP2A-var.3	303
REL	293
Rxra	291
BHLHE41	273
FLI1	270
RUNX3	270
EGR2	270
Nfe2l2	266
TCF7L2	263
Tcf21	262
E2F6	259
Pparg::Rxra	258
ZNF263	258
NR1H2::RXRA	251
USF1	251
TP63	243
USF2	240
ETS1	238
Tcf7	236
RELA	234
OTX2	232
NRF1	231
MAF::NFE2	221
TFAP4	217
CEBPA	212
NFKB2	198
HEY1	193
BHLHE40	191
MAFF	181
KLF5	179
NEUROD1	175
MAFK	174
MAFG	166
ELK1	152
Foxo1	148
POU5F1B	148
CDX2	147
HSF1	145
Klf1	144
MEF2B	143
Pou5f1::Sox2	140
SOX9	139
Hand1::Tcf3	132
NR3C2	131
CEBPD	131
NFIA	129
Bach1::Mafk	129
STAT1::STAT2	126
SNAI2	123
PAX5	120
ETV1	119
RUNX2	117
NKX3-2	112
Mafb	112
SMAD2::SMAD3::SMAD4	111
TFDP1	108
Arnt	108
KLF9	106
Dux	105
SP3	105
Foxj2	104
DUX4	103
ETV6	97
HNF4G	95
CREB1	93
Stat5a::Stat5b	88
THAP1	83
ERF	82
ARNT::HIF1A	80
PRDM1	79
MEF2A	76
EOMES	74
FEV	72
MYB	72
Arid3a	71
Nr1h3::Rxra	71
PDX1	69
SPIB	68
IRF1	66
ATF4	65
RARA::RXRA	59
Gfi1b	58
HNF1B	54
Ahr::Arnt	54
MYBL2	53
Nkx3-1	51
STAT1	50
ELK4	50
BCL6B	48
TEAD2	47
Mecom	47
TP73	47
ELK3	47
MAFG::NFE2L1	46
Ddit3::Cebpa	44
NFIL3	44
TP53	44
FOXP1	44
POU2F2	43
Hic1;	43
Bcl6	42
ETV3	41
Vdr	40
NFATC3	40
EGR4	40
RXRB	39
NR4A2	37
Atf1	36
REST	35
RXRG	35
NR2C2	35
E2F3	34
SCRT1	34
BATF3	31
ETV4	30
ZNF143	29
HINFP	29
SRF	27
Sox17	27
TBX1	24
FOXH1	23
NR3C1	23
NFATC1	21
SP4	20
Srebf1(var.2)	18
MEF2D	17
GRHL1	17
CREB3L1	16
EGR3	16
SP2	16
Gmeb1	15
KLF13	15
RFX5	14
RXRA::VDR	13
FOXP3	13
Arntl	13
NFYB	12
LEF1	11
RORA(var.2)	11
ZBTB18	10
HNF1A	10
BARX1	10
GMEB2	9
ZBTB33	9
NFYA	8
HOXA13	8
Rarg	8
PPARG	8
MEIS1	7
Nr5a2	7
XBP1	7
HSF2	6
GLI2	6
Rarb	6
SREBF1	6
TBX19	5
SREBF2	4
RORA	4
FOS::JUND	4
ELF5	4
CREB3	4
SMAD3	4
Ascl2	4
Pitx1	3
FOS::JUNB	3
Alx4	3
Pax6	3
Creb3l2	3
HOXA5	3
PROX1	3
NKX2-3	3
RFX2	2
CLOCK	2
FOXO4	2
Id2	2
SOX4	2
NFIC::TLX1	1
Stat4	1
RARA	1
ISX	1
E2F8	1
Hoxa9	1
NFAT5	1
ESR1	1
IRF2	1
MIXL1	1
FOS::JUN(var.2)	1
Hes1	1
E2F2	1
PAX3	1
Arx	1
Hoxa11	1

Motif name

Number of overlap

2500

1812

1405

1337

1333