NAIK Genome Database

experiment name	hs_U87_U87_undef_POL_SRX129115	number of peaks	54346
antibody	POL
cell line	U87	Number of reads	47836962
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
E2F1	2193
FOS	2164
SP1	2147
ERG	1969
Gabpa	1701
ELF1	1673
E2F4	1552
ZNF740	1462
FOSL2	1462
BATF::JUN	1435
ELK1	1434
Esrrg	1397
JUND	1366
YY1	1359
TAL1::TCF3	1304
FOSL1	1299
MYCN	1293
ZBTB7A	1274
MYC	1271
ETS1	1248
EGR1	1192
Tcf12	1165
JUN	1102
PBX1	1075
TCF3	1067
FOS::JUN	1066
STAT3	1057
HEY1	1031
MYBL1	1025
TFAP2A-var.2	1020
TCF4	996
NFIC	994
NR2F1	993
RUNX1	932
Atf3	921
TFAP2A	912
ETV1	882
EGR2	853
NRF1	836
TFAP2C	812
MAX	801
Sox2	801
ELK4	649
Tcf21	634
KLF5	597
ELK3	597
FLI1	563
E2F6	560
TFDP1	552
ZEB1	551
ELF3	550
FOXA1	540
KLF4	537
CTCF	530
NFKB1	513
CEBPB	506
ETV6	504
TEAD4	497
ERF	481
MAX::MYC	475
RUNX3	467
SPI1	462
ZNF263	458
BHLHE41	456
Esrra	446
ETV3	439
TEAD1	438
EBF1	417
TFAP4	416
Ar	413
REL	413
STAT1::STAT2	409
BHLHE40	404
TFAP2A-var.3	401
NFE2	400
Nfe2l2	384
RELA	380
GATA3	373
USF1	372
Foxa2	368
USF2	362
Gata1	358
NEUROD1	341
Pparg::Rxra	337
Rxra	327
CEBPA	325
Hnf4a	321
JUNB	317
GATA2	315
SP3	312
NR1H2::RXRA	309
MAF::NFE2	300
CREB1	294
RUNX2	288
Klf1	284
Gata4	282
E2F3	281
KLF9	279
TP63	276
NFKB2	276
SMAD2::SMAD3::SMAD4	257
Atf1	247
THAP1	247
SOX9	245
MAFF	243
OTX2	242
CEBPD	235
SP2	227
PAX5	225
MAFK	213
Arnt	212
Bach1::Mafk	202
MAFG	199
Hand1::Tcf3	197
GATA5	196
TCF7L2	189
Foxo1	185
NFATC3	184
NFIA	182
HSF1	178
FEV	176
NFYB	172
Mafb	171
SP4	171
NR3C2	168
Foxj2	165
Tcf7	162
ARNT::HIF1A	161
Stat5a::Stat5b	151
NFYA	150
POU5F1B	148
STAT1	148
MYB	146
GATA1::TAL1	137
IRF1	137
EGR4	134
BATF3	123
ZNF143	116
HNF4G	114
MEF2B	111
Nr1h3::Rxra	110
XBP1	108
PDX1	102
PRDM1	101
CDX2	98
Pou5f1::Sox2	97
Ahr::Arnt	95
SNAI2	94
NKX3-2	94
GMEB2	93
ETV4	88
NR4A2	87
HINFP	87
MEF2A	86
RARA::RXRA	85
Arid3a	80
ATF4	78
EGR3	73
Gmeb1	69
Bcl6	68
BCL6B	68
FOXP1	67
NFATC1	64
Gfi1b	64
TP53	61
EOMES	58
TEAD2	58
MAFG::NFE2L1	54
Dux	52
SRF	50
TP73	50
RXRB	48
Hic1;	48
Ddit3::Cebpa	48
ZBTB33	48
Arntl	47
TBX1	46
NFIL3	45
SPIB	45
KLF13	44
Vdr	43
DUX4	43
FOXH1	41
RXRG	41
HNF1B	35
MYBL2	35
NR2C2	35
POU2F2	33
FOXP3	32
CREB3L1	31
SREBF1	31
Sox17	30
Rarg	28
RFX5	27
ZBTB18	26
REST	25
NR3C1	24
MEIS1	23
SCRT1	23
ELF5	23
Nkx3-1	21
TBX19	20
SREBF2	20
Rarb	19
Ascl2	18
GRHL1	17
CREB3	17
MEF2D	16
GLI2	16
RXRA::VDR	15
Mecom	15
PROX1	14
CLOCK	14
LEF1	12
PPARG	11
FOS::JUND	10
FOS::JUNB	10
Pax6	9
BARX1	9
Creb3l2	8
RORA(var.2)	8
SMAD3	7
HOXA13	6
IRF2	5
E2F8	5
Nr5a2	5
HNF1A	5
Pitx1	5
HOXA5	5
Hes1	5
Arx	5
FOXO4	4
Rfx1	4
HSF2	4
Srebf1(var.2)	4
RORA	4
Hoxa9	4
MIXL1	3
RARA	3
Id2	3
Alx4	2
IRF9	2
Stat4	2
PAX3	1
ATF7	1
FOS::JUN(var.2)	1
Nkx2-5-var.2	1
MTF1	1
ESR1	1
Hoxa11	1
TBP	1
RFX2	1
Klf12	1
POU3F2	1
SREBF2(var.2)	1

Motif name

Number of overlap

2193

2164

2147

1969

1701